Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0616 ATGGGAAAGGCCGAAGAAGAACAGCCTTTGCCTTCCAGTGTTGCCTCCGGCGATCCTGAGCAGAATGTGGAGGCAAGCTGTGGGTGTAGATGTTCAAAAATTCGGAAATTCATTGGCCTCAGATGCATTTTCGTCCTGCTGCTATCTGTTGCTTTGTTCCTCTCTGCTTTATTTTGGTTACCCCCATTTCTTCGGTACGCAGATCAGAAGGATCTGGGCTCCGATTCAAAATATAAAGGTCATGATATTGTTGCAAGTTTTATTGTTAAGAAGCCAGTCTCTCTGCTGCAAGACAACATTTCGCAGCTTGTAGATGACATTTTTGATGAGATATTAGTTCCCTCTACCAAAGTGGTTATATTGTCTCTTGATCCCCTGTCTGGGTCAAACATGACCAAAGTGGAGTTTGCGGTTGATCCTGATAATAAATACTTTGGAATGTCTTCAGCTTCTGCTAGTTTGATAAGATCATCTTTCGAATCTCTGATTGCAGGCCAAACAGTTCTCAGGCTGACTTCATCCTTGTTTGGAGATCCCTTCTCTTTTGAAGTGCTAAAATTTAAGGGAGGAATTACTATAATTCCTAGACAACACGCATTTCTTCTGCAGAGGCCACAACCACTATTCAACTTTTCTTTAAATTTCTCTATTCGTGTAATACAATCGAATTTCAATCAATTGACAAGTGAGTTAGAGTCTGGACTACATCTGGCATCATATGAGGTCTGTTATTATTGTCTTTTACTTCCTAATCTTAGACTTGTAGTATGGATGGACCGTGTTGATTCTAATCACAATTTTATAATTGCAATGCAGAACTTGTATGTCATCTTATCGAATTCTGAAGGTTCAACAGTGGCTGCTCCTACTATTGTTCAATCATCTGTTTTATTTGCAGTTGGGAATGGGGATATTCCATCAAGGGAGAGGTTAAAGCAACTGGCAAAAACCATCACAGGATCTCATTCAAGGAACCTTGGCTTGAACAACACTGAATTTGGTAGGGTTAGGCAGGTTCGACTTTCATCCATCTTGCAACACTCCCTTAATGGTAGTGATGCAAGTGGCACTTCTTCATCGCCAGCTCCTGTTCCTCTGCCTCATTCACACCACCACCACCACCACCACCATCATCACAATGCCCATCTTGTTCCTGCAACTTCACCTACACCAGCACCTGAAATTGGGAAACACGCAACTCCACCTGAAATTGGTTCTCCTGCAGCTGCAAAAAATGTGCCTCCAGAAGGGAGGAGTTCTCGATCTGAGCCTCCTGTTTGTCAATTTTGGCATAGAAAGAGGTCTTCCCAAAATGCTGGAAAGCATCCTCATTTGATACCTGCGGCTGCACCTAACATTGCTGCACATTATCCCGTTGCCTCACCAAAAAAACAAGTTGGACCACCAGGACTTGTTTCTCATTCTGTTCCCGTATCAAGTCCTTTGCCAAATGTGGCTTTTGCGCATGCTGAGCCCCCTCCTAAGACTGAACCAGCTAGAGAACGTTCTAGTACACATTCTCACGAGCCATCACCATTTCCATCTTGTGCAGGTACACGTGTGACTGAGAAATGGGCAACTTTAATATTGGTAGTACTTTGTGTTACATGTATAACAAATGACTGA 1626 0.4287 MGKAEEEQPLPSSVASGDPEQNVEASCGCRCSKIRKFIGLRCIFVLLLSVALFLSALFWLPPFLRYADQKDLGSDSKYKGHDIVASFIVKKPVSLLQDNISQLVDDIFDEILVPSTKVVILSLDPLSGSNMTKVEFAVDPDNKYFGMSSASASLIRSSFESLIAGQTVLRLTSSLFGDPFSFEVLKFKGGITIIPRQHAFLLQRPQPLFNFSLNFSIRVIQSNFNQLTSELESGLHLASYEVCYYCLLLPNLRLVVWMDRVDSNHNFIIAMQNLYVILSNSEGSTVAAPTIVQSSVLFAVGNGDIPSRERLKQLAKTITGSHSRNLGLNNTEFGRVRQVRLSSILQHSLNGSDASGTSSSPAPVPLPHSHHHHHHHHHHNAHLVPATSPTPAPEIGKHATPPEIGSPAAAKNVPPEGRSSRSEPPVCQFWHRKRSSQNAGKHPHLIPAAAPNIAAHYPVASPKKQVGPPGLVSHSVPVSSPLPNVAFAHAEPPPKTEPARERSSTHSHEPSPFPSCAGTRVTEKWATLILVVLCVTCITND 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0616 541 MobiDBLite consensus disorder prediction 482 517 - -
Lele08g0616 541 MobiDBLite consensus disorder prediction 367 382 - -
Lele08g0616 541 MobiDBLite consensus disorder prediction 348 364 - -
Lele08g0616 541 MobiDBLite consensus disorder prediction 348 425 - -
Lele08g0616 541 MobiDBLite consensus disorder prediction 1 23 - -
Lele08g0616 541 PANTHER F20B24.21 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0616 Lele-ChrLele08 3743560 3746883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0616 1 538 C3H Transcription Factor Family AT3G10810 42.831 1.27e-91 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0616 08 3743560 3746883 Lele08g0616 08 3743560 3746883 ECH
Lele05g0776 05 4590817 4594915 Lele08g0616 08 3743560 3746883 hybridization
Lele06g0616 06 3700970 3705169 Lele08g0616 08 3743560 3746883 hybridization