Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0611 ATGGCATCTGATCCATGGATTAGACAATATAATGAAGCATCAAAACTAGCGGAAGAAGTCAAGGGAATGATTTCTGCTAAGAGTGGATTTCCCCCTTCTGGACCTGAAACACAGCGTCATTTATCAGCAGCCCGGAGAAAAGTAACCATACTGAGGACTAAAGTTGAAATTCTGCAGTCACCTCTCCCAACGCGGCCTGGCAAGCAACAAATAACAGGAAAAGAAATGAATCGTCGCCAAGACTTACTTGCTAATATAAGCACCATAGCAAATGAGATGGCTGCTGCCCTTAACATGTCTGGTCTTGCCAATAGAGATAGCCTGCTAGGCCCTGATAAAAAGTCTGAAGAAGTCATGAAGAAAGCAGCTAGCATGGACAACCAAGGCCTTGTGGGTTTTCAACGACAAATTATTAGAGAACAAGATGAAGATCTTGAAAAATTGGAAGGGACAGTTACAAGCACCAAACACATTGCATTGGCAGTTAACGAAGAACTTAGCCTACATACTAGGCTTCTGGATGATTTGGATGAGCATGTGGACACAACCAATTCCCGCCTACAGATGGCGCAAAGGAGGTTGGCTGTGTTGAGCAGGGGCACTAAAGGCGGTTGCTCTTGCATGATCCTGTTAGTCCTTGTTATCGTGATTATGATAATTGTTGCATGGGCATTGATTAAATATTTGTAG 690 0.4348 MASDPWIRQYNEASKLAEEVKGMISAKSGFPPSGPETQRHLSAARRKVTILRTKVEILQSPLPTRPGKQQITGKEMNRRQDLLANISTIANEMAAALNMSGLANRDSLLGPDKKSEEVMKKAASMDNQGLVGFQRQIIREQDEDLEKLEGTVTSTKHIALAVNEELSLHTRLLDDLDEHVDTTNSRLQMAQRRLAVLSRGTKGGCSCMILLVLVIVIMIIVAWALIKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0611 229 Coils Coil 173 193 - -
Lele08g0611 229 SMART tSNARE_6 130 197 IPR000727 -
Lele08g0611 229 Gene3D - 137 199 - -
Lele08g0611 229 FunFam syntaxin-51 isoform X2 137 199 - -
Lele08g0611 229 CDD SNARE_Qc 138 195 - -
Lele08g0611 229 SUPERFAMILY SNARE fusion complex 126 196 - -
Lele08g0611 229 Pfam SNARE domain 172 221 IPR000727 -
Lele08g0611 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
Lele08g0611 229 PANTHER SYNTAXIN 22 217 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0611 Lele-ChrLele08 3697767 3700254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0611 2 229 SNARE and Associated Proteins AT1G16240 57.826 1.32e-92 270