LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g0592	ATGGTGGGTGATGTGGCTCAGATAATGGAATCTCAAGGGGAAGCAGCAGCAACTCAAGAGCTAATAAAAACACAATCTTTGGCTTACCAAGGGTCTTCCTTATACAATCTGACTCTTGATGAAGTTCAGAACCAGCTTGGGAATTTAGGGAAGCAACTAGGAAGCATGAACCTTGATGAACTGCTCAAGAGTGTGGAAACTGCAGAAACTACTCATGGGTCTTCTTTGTCTCTGAATCGACAGAACAGCATGACATTATTATCTGGGGATGTAAGAAAGAAAACCGTTGATGAAGTTTGGAGAGATATACAACAACACAAGCAGAGCAATAATAATAATCAAGATGGGAAATCTCAGGAAAGACATCCAACACTAGGGGAGATGACTCTTGAGGATTTTCTTGTGAAAGCAGGAGTGAGTTTTGATTCAAATATTGTTGCTTCTTCTGATCAACACAACAATATTTCACCACAACAAGAACAAGCTCATTGGATTCAATACCAACTCTGTTCACTGCAACAAAATCATCATGATGTGATGGTCGGTTTAATGCCTAGCCATGGAGTTCAACAACAACAACAGGCTTTGCCTGTAGCAGTAGCAGTAGCGAACCCGGTTTTGGATTCATCTTACTCTGAAAATATGGTGGCAACAATGTCACCATCGTCTTTGATGGGTAAGTTATCAGACATACAGAGTCCAGGAAGGAAGAGGGAGGCCTCTGGTGGTGATGTGGTTGAGAAAACCATGGAGAGAAGGAAAAAGAGGATGATCAAGAATAGGGAATCTGCAGCTAGATCACGAGCAAGAAAGCAGGCTTACACGCAGGAGCTGGAGATTAAAATTGCACGTTTAGAAGAGGAGAATGAAGGGCTCAGAAGACAGTATGAGATGGAGAGAGTGTTGCCATGTGTTCCACCAGATGATGAGCCAAAGCATCAGCTTCGCAGAACAAGTTCAGCTTCTTTTTGA	972	0.4249	MVGDVAQIMESQGEAAATQELIKTQSLAYQGSSLYNLTLDEVQNQLGNLGKQLGSMNLDELLKSVETAETTHGSSLSLNRQNSMTLLSGDVRKKTVDEVWRDIQQHKQSNNNNQDGKSQERHPTLGEMTLEDFLVKAGVSFDSNIVASSDQHNNISPQQEQAHWIQYQLCSLQQNHHDVMVGLMPSHGVQQQQQALPVAVAVANPVLDSSYSENMVATMSPSSLMGKLSDIQSPGRKREASGGDVVEKTMERRKKRMIKNRESAARSRARKQAYTQELEIKIARLEEENEGLRRQYEMERVLPCVPPDDEPKHQLRRTSSASF	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g0592	323	MobiDBLite	consensus disorder prediction	240	273	-	-
	Lele08g0592	323	Gene3D	-	250	302	-	-
	Lele08g0592	323	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 2	250	302	-	-
	Lele08g0592	323	SMART	brlzneu	248	321	IPR004827	GO:0003700\|GO:0006355
	Lele08g0592	323	Pfam	bZIP transcription factor	252	295	IPR004827	GO:0003700\|GO:0006355
	Lele08g0592	323	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	29	321	IPR043452	GO:0003700\|GO:0045893
	Lele08g0592	323	Coils	Coil	268	302	-	-
	Lele08g0592	323	MobiDBLite	consensus disorder prediction	230	273	-	-
	Lele08g0592	323	CDD	bZIP_plant_BZIP46	252	298	-	-
	Lele08g0592	323	SUPERFAMILY	Leucine zipper domain	252	298	IPR046347	GO:0003700\|GO:0006355
	Lele08g0592	323	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	255	270	IPR004827	GO:0003700\|GO:0006355
	Lele08g0592	323	MobiDBLite	consensus disorder prediction	303	323	-	-
	Lele08g0592	323	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	250	297	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g0592	Lele-ChrLele08	3599479	3601330	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g0592	20	323	bZIP Transcription Factor Family	AT3G56850	52.744	5.47e-89	266

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele08g0592		bZIP_1	3.5e-12	CL0018