Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0571 ATGAGTAACGATAGTCTAGGTGAAGAAGTTATCACACCATATACACCTTCTACGCTGGATTCTGATGTTGGATATTTTGAACTAGTTATAAAGATGTACCCTAAAGGAAGGATGTCACACCACTTCCGTGAGATGCGTGTTGGAGACTATCTTGCTGTTAAAGGACCCAAAGCCATACTAGAAAACCCGGAAGACAGGACAAAGGTGCATCGTATCTATGCCAATGTTACATGTGAGGACATTCTTTTGAAGATCCATAGCTTGATACTGAAGTTGATTATTTTGTCCATGCATGACTATGGTCATTCGTACACAGTCTGCAGCAGTAGGCCTGCTGAGAAATTTATGCCTTGTGACACAATTCTTGAAGAATTGGAGGGTCTTGCTTCAAAGTATCCAGATCGCTTTAAAGTATACTGTGTCTTAAATCAGGAGATGATTCAAACACATTGCCCTGATCCAGCCAATGATATCAAGATTTTGAGGTGTGGCCCACCACCCATGAACAAGGCTATGGCTGCTCACCCGGATATTCCCCTGAGATGCAGTTTCAGTTCTGAGTGA 564 0.4238 MSNDSLGEEVITPYTPSTLDSDVGYFELVIKMYPKGRMSHHFREMRVGDYLAVKGPKAILENPEDRTKVHRIYANVTCEDILLKIHSLILKLIILSMHDYGHSYTVCSSRPAEKFMPCDTILEELEGLASKYPDRFKVYCVLNQEMIQTHCPDPANDIKILRCGPPPMNKAMAAHPDIPLRCSFSSE 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0571 187 Pfam Oxidoreductase FAD-binding domain 7 58 IPR008333 -
Lele08g0571 187 Gene3D Translation factors 1 55 - -
Lele08g0571 187 PANTHER NADH-CYTOCHROME B5 REDUCTASE 58 173 IPR001834 GO:0016491
Lele08g0571 187 CDD cyt_b5_reduct_like 7 170 - -
Lele08g0571 187 Gene3D - 56 177 IPR039261 -
Lele08g0571 187 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 59 172 IPR039261 -
Lele08g0571 187 SUPERFAMILY Riboflavin synthase domain-like 7 57 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0571 Lele-ChrLele08 3455517 3457230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0571 2 175 NADPH P450 reductases AT5G17770 50.000 5.78e-62 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0571 08 3455517 3457230 Lele08g0571 08 3455517 3457230 ECH
Lele05g0728 05 4291645 4294510 Lele08g0571 08 3455517 3457230 hybridization
Lele06g0565 06 3410361 3412005 Lele08g0571 08 3455517 3457230 hybridization