Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0568 ATGAGTTTTCATCACTTCATAAATGGAGGCGACGGTTTCCGCGGGGCTATAAAACAATTACCCTCCGCTCCTCTTCTAGTTCCCCAGTACCCACTCTCTCCCATTTTTGGGGCCATAGGTGGTCATCCCGGTGAGAACGAGTCTTACAAATCTGGGATTGGATTCCAGATTCTGAACCCTTCCTTCATGGGGTCCAGAGCTGCAGAAAAAAGCGTCGGTGAAGTCGACGGCCATTTCCTGGTCGAGACGGACGGCCTGTCCTTGAAACTTAGTGAAGAAGCCGAAGCTAAGAGGCCGGATGCCGGCAAGAGTGGCTACACGAAGCTCTGTGCCAGAGGCCACTGGAGGCCCGGTGAAGATGCCAAGCTCAAAGAGCTGGTCGCTCAGTATGGTCCTCAAAACTGGAACTTGATCGCCGAGCATCTCCAAGGACGATCAGGTAAGAGTTGCAGATTGAGGTGGTTTAACCAGCTGGATCCTAGGATTAACAGGAGGGCTTTCTCCGAGGAAGAAGAGGAGAGGCTGTTGGGCGCTCATAAGGCGTACGGTAACAAGTGGGCTCTGATTGCGAGGCTGTTCCCGGGGAGGACCGATAATGCGGTGAAGAACCACTGGCACGTGATCGTGGCGAGGAGGCAGAGAGAACAGTCAAACGTTTTCAGGAGGAGGAAACCCACTTCTTCTGAGGACAATATTGCAAATGGATTAAAACTCAGCCTAACCAACAATACAGGCAGTGAATCGAGCATCTCAAGCACCAGGGACGAGTCTGGTTCAACCTGCACTAATCTCTCACTCACTCCCTCGTCCGCCAAACCCTCTCCCTTTTGCTCTAATATGAGCCCAGGCCAGGGAACACCGATCGGTACGCTTGAGTATATATTTTTTGTGTGTATTATTAGAGGAAATAGTGGAGGCAGGGGAAAGGGGAAGGGTGTGGGGCAATCGAATAATAATTCGGATTCAAAATCGGAAGTATCGGCGAGCGAGTCAGTGGGAACCAACAGGAACAATTTGTCACATTCAGGGGGAAGGGAAAACGTGGGAGATAAGATAGAGGTGGTATTCATTGATTTTCTGGGGGTGGGAACTGGCGCATGA 1101 0.5114 MSFHHFINGGDGFRGAIKQLPSAPLLVPQYPLSPIFGAIGGHPGENESYKSGIGFQILNPSFMGSRAAEKSVGEVDGHFLVETDGLSLKLSEEAEAKRPDAGKSGYTKLCARGHWRPGEDAKLKELVAQYGPQNWNLIAEHLQGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLLGAHKAYGNKWALIARLFPGRTDNAVKNHWHVIVARRQREQSNVFRRRKPTSSEDNIANGLKLSLTNNTGSESSISSTRDESGSTCTNLSLTPSSAKPSPFCSNMSPGQGTPIGTLEYIFFVCIIRGNSGGRGKGKGVGQSNNNSDSKSEVSASESVGTNRNNLSHSGGRENVGDKIEVVFIDFLGVGTGA 366
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0568 366 Gene3D - 112 163 - -
Lele08g0568 366 PANTHER MYB PROTEIN-RELATED 112 286 - -
Lele08g0568 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 213 IPR017930 -
Lele08g0568 366 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Lele08g0568 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 158 IPR017930 -
Lele08g0568 366 Pfam Myb-like DNA-binding domain 164 207 IPR001005 -
Lele08g0568 366 Pfam Myb-like DNA-binding domain 112 158 IPR001005 -
Lele08g0568 366 MobiDBLite consensus disorder prediction 229 278 - -
Lele08g0568 366 CDD SANT 166 206 IPR001005 -
Lele08g0568 366 ProSiteProfiles Myb-like domain profile. 112 158 IPR001005 -
Lele08g0568 366 CDD SANT 115 156 IPR001005 -
Lele08g0568 366 Gene3D - 165 235 - -
Lele08g0568 366 MobiDBLite consensus disorder prediction 306 345 - -
Lele08g0568 366 MobiDBLite consensus disorder prediction 310 344 - -
Lele08g0568 366 MobiDBLite consensus disorder prediction 216 278 - -
Lele08g0568 366 FunFam MYB transcription factor 112 163 - -
Lele08g0568 366 SUPERFAMILY Homeodomain-like 112 205 IPR009057 -
Lele08g0568 366 SMART sant 163 211 IPR001005 -
Lele08g0568 366 SMART sant 111 160 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele08g0568 Lele-ChrLele08 3433416 3434722 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0568 102 363 MYB Transcription Factor Family AT5G17800 48.905 5.70e-72 225
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g0568 Myb_DNA-binding 2.2e-15 CL0123