Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0567 ATGGAAGATCAAGCTGAGGGGCAACAACAGGAGACCAATACTCGGAGCGAGCCGGTGAGGTCAAGGTGGACTCCCAAGCCTGAGCAAATCCTCATCCTTGAATCCATCTTCAACAGTGGCATGGTTAATCCTCCCAAGGAGGAAACCATCCGCATCAGAAAGCTCCTCGAGAAGTTCGGCTCCGTCGGCGACGCTAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAACGCCAGATGCAGGCCTCCATCGACCAGCGAAACCAGCTTCAGCCTCAGCTTGGTGTTGCAGGTGCAATTCCTTATGATCATCATCATCAACCTCTCACCACCTCCTCCAATACTTCTTATCCACTTCCTCCTGTTACAACTACCGTGCCTCTTGCCGCCGCTTCTCCGTCTTTCCTTGATCTCTCCGGTTCGTCTTCTTCTTCTTCTGGCATGCTTGCCGGCCAAGAAGCCCTTGACGGTCTTTTCTCGGTGGCTTCTCAAATGGGTTTCCCCGAATTTGATCACACTTCTGCTGCTTCTTCGGCTCTATACCCTCCCCCAACTCATGCTTCCTCCTTCAACTATCATTCTGGACTGATCACAGTGTTTATCAATGGAGTAGCAACAGAAGTTCCAAGGGGAGCATTGGACATAAAAACAATGTTTGGGCAAGACGTAGTGTTAGTTCATTCCTCCGGAGTTCCCCTTCCCACCAATGACTTTGGTTTCCTGATGCAGAGCTTGCAGCATGGCGAAAGTTACTTTCTGGTGATTACCGCATATATCTCCAATTTATTTCTATGA 810 0.5074 MEDQAEGQQQETNTRSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASIDQRNQLQPQLGVAGAIPYDHHHQPLTTSSNTSYPLPPVTTTVPLAAASPSFLDLSGSSSSSSGMLAGQEALDGLFSVASQMGFPEFDHTSAASSALYPPPTHASSFNYHSGLITVFINGVATEVPRGALDIKTMFGQDVVLVHSSGVPLPTNDFGFLMQSLQHGESYFLVITAYISNLFL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0567 269 MobiDBLite consensus disorder prediction 1 24 - -
Lele08g0567 269 SMART HOX_1 18 85 IPR001356 GO:0003677
Lele08g0567 269 PANTHER WUSCHEL-RELATED HOMEOBOX 11 4 261 IPR044558 GO:0003700|GO:0048830
Lele08g0567 269 Gene3D - 20 89 - -
Lele08g0567 269 Pfam Homeodomain 20 80 IPR001356 GO:0003677
Lele08g0567 269 FunFam WUSCHEL-related homeobox 11 20 87 - -
Lele08g0567 269 ProSiteProfiles 'Homeobox' domain profile. 16 81 IPR001356 GO:0003677
Lele08g0567 269 SUPERFAMILY Homeodomain-like 15 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0567 Lele-ChrLele08 3427426 3428989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0567 14 260 Wox Gene Family AT3G03660 53.462 9.25e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele08g0567 Homeodomain 2.8e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0567 08 3427426 3428989 Lele08g0567 08 3427426 3428989 ECH
Lele05g0724 05 4265969 4267735 Lele08g0567 08 3427426 3428989 hybridization
Lele06g0561 06 3375566 3377305 Lele08g0567 08 3427426 3428989 hybridization