Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0564 ATGAACGCACGCAGTTCCCCAGTATGTATAGTTATCATCGTAGTTGACCTAGGATCGGTGGATATTAAGGGATGCGATGCCTCGCTTCTGATAGATTCTAAGAACAAGACATTGATGAGATCAGAGAAAGACGCGGGGTTGGATAGCGTATTCCTTCGAGGATTCGATGTAATTGACGAGATCAAAGAAAGCCTGGAAACGGAATGCCCTTCTACGGTTTCGTGTGCCGATATCATAGCACTTGTCGCCAGAGATGCGGTGGGCGTCGCCGGAGGACCCAAATATGAGGTTCTCACAGGGAGGCGCGATGGCCTTGTTTCAAATGCGGGTGATGTAAACTTACCACAGCCTGAATTTCCAATGAAGCGAGCTCTTGGTTTTTTCACCAATGTCGGGTTGACATTAGCTGACATGGTCACACTTTTGGGTGCTCATACGATTGGTATTGCCCATTGTGGTTTCTTCACATCTAGGCTTGAAGGGCATCAATCTAGTGATCACCCTCCAATGGATCCAGTGTTGAAAGCCAAGCTGACCAAGTTTTGTGCTCATGATGAAAATCGCAAGGCGTTTATGGACCAAGCCACACCATTTGTTTTTGACAATTCGTTCTACAAGCAGCTTGTTCTGAGGAGGGGTATATTGGAACTGGATGAACGCCTTGCGTTTGATAATTCCACTATAGCTCTTGTTTCCAGGTATGCATCAGACAATGAGGCGTTTCTGCGGAGCTTTGCAAATGCCATGGTCAAGTTGGGAAGCATTCAAGTTCTAACTGGAGAGGAAGGGGAGATTCGAAAAAATTGTAGGGCTTTTAATAATCCCAAGTAG 831 0.4609 MNARSSPVCIVIIVVDLGSVDIKGCDASLLIDSKNKTLMRSEKDAGLDSVFLRGFDVIDEIKESLETECPSTVSCADIIALVARDAVGVAGGPKYEVLTGRRDGLVSNAGDVNLPQPEFPMKRALGFFTNVGLTLADMVTLLGAHTIGIAHCGFFTSRLEGHQSSDHPPMDPVLKAKLTKFCAHDENRKAFMDQATPFVFDNSFYKQLVLRRGILELDERLAFDNSTIALVSRYASDNEAFLRSFANAMVKLGSIQVLTGEEGEIRKNCRAFNNPK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0564 276 PANTHER - 23 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 Gene3D - 22 273 - -
Lele08g0564 276 Gene3D Peroxidase, domain 2 115 252 - -
Lele08g0564 276 Pfam Peroxidase 19 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 CDD secretory_peroxidase 24 272 IPR033905 GO:0004601|GO:0042744
Lele08g0564 276 ProSiteProfiles Plant heme peroxidase family profile. 22 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Haem peroxidase superfamily signature 73 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Haem peroxidase superfamily signature 91 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Haem peroxidase superfamily signature 137 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 FunFam Peroxidase 115 252 - -
Lele08g0564 276 ProSitePatterns Peroxidases proximal heme-ligand signature. 137 147 IPR019793 -
Lele08g0564 276 SUPERFAMILY Heme-dependent peroxidases 23 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 247 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 72 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 91 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 191 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 11 31 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 53 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 207 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0564 276 PRINTS Plant peroxidase signature 136 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0564 Lele-ChrLele08 3412077 3413452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0564 22 273 Peroxidase AT5G17820 51.575 2.51e-84 255