Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0562 ATGAAGATATCGGTTGTTGTGTGCTTCTTGGTGGTGGTGCTTCCCATGGCATTTGCTCAGCTCAAGGTCGGATTCTATAAGTCGTCTTGCCCAAAAGCTGAGTCCATCGTGAAGCAAGCGGTGCAGAAGCGATTCAACAACGACAACACCATCACTGCAGCCTTGCTTCGCATGCACTTTCACGACTGTTTCGTTCGAGGTTGCGATGCATCATTACTGATAAACTCCACTGACGCAGAGAAAGACGCCGGTCAAAATGCGAGCGTACGAGGATTTGATTTGATCGATGACGTGAAGGAAAGCCTTGAAGCAGCCTGCCCTTTAACGGTGTCGTGTGCTGATATCATAACTCTAGCCACCAGAGACGCCGTGGCTCTTGCCGGAGGACCCAAATACGTGGTTCCCACCGGACGACGTGACGGCCTCGTCTCTAAAAGCGCCGACGTTGATTTGCCAGGACCAGGGATCACTGTGCAGAATGCATTGAAGCACTTTGCCGACAAGGGAATCGAACGACAAGACATGGTGAGCCTTATGGGTGGACACACAGTGGGAAAGGCATTTGGTACATTCTTGGACGCCAAGACGCCCTTCGTAGTGGATAACCAGTACTATAAGCAGATTCTTCGAAATAAGGGCGTTCTCTCTATTGATCAAAACCTTGCTGTTTCAACGTCAACTAAGAGTATTGTCACTGCTCTTGCATCTAACTCTACCAAGTTTCAGAGGAGCTTCGCTAATGCAATGGTCAAGATGGGTCGAATTCAAGTTCTGGTTGGTAATGTGGGAGAAATTCGTAAGAAATGCAGTGCTTTTAACAATTAA 825 0.4824 MKISVVVCFLVVVLPMAFAQLKVGFYKSSCPKAESIVKQAVQKRFNNDNTITAALLRMHFHDCFVRGCDASLLINSTDAEKDAGQNASVRGFDLIDDVKESLEAACPLTVSCADIITLATRDAVALAGGPKYVVPTGRRDGLVSKSADVDLPGPGITVQNALKHFADKGIERQDMVSLMGGHTVGKAFGTFLDAKTPFVVDNQYYKQILRNKGVLSIDQNLAVSTSTKSIVTALASNSTKFQRSFANAMVKMGRIQVLVGNVGEIRKKCSAFNN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0562 274 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Lele08g0562 274 Pfam Peroxidase 37 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 FunFam Peroxidase 24 164 - -
Lele08g0562 274 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PANTHER - 190 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 Gene3D - 24 151 - -
Lele08g0562 274 SUPERFAMILY Heme-dependent peroxidases 20 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 Gene3D - 253 273 - -
Lele08g0562 274 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 Gene3D Peroxidase, domain 2 191 252 - -
Lele08g0562 274 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Lele08g0562 274 ProSiteProfiles Plant heme peroxidase family profile. 20 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele08g0562 274 Gene3D Peroxidase, domain 2 152 187 - -
Lele08g0562 274 CDD secretory_peroxidase 20 272 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0562 Lele-ChrLele08 3407291 3408193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0562 10 273 Peroxidase AT5G17820 52.492 5.63e-107 313