Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0555 ATGCCTAGCTCTGTTTCGCAATCGAAAAGCTTGTTCTTGAATGTTTCGTTGCTCCTCCTCGTATGTGCTTTCCTGATTATCTACTTCCACTCTTCGGAACTCCCTGTTCGGCGGAACCGTGCCGCCTTAGGCGACGGTGCCGACCATGATTGCAACATCTTCCACAGTCTAGAAGGCTACAGAGCCAAGTGTTTGCACCTAAAATCCAACGGCCCATGCGTTTCACAGGGCTATATTGACTACCTTTACCTTTTCTACTGCGATTTGGGTCGATTCCCTTTGTTGGGTTATACTCTTCTCTTTCTTTGGCTCCTAGTCTTGTTTTACCTGCTCGCTAATACAGCTTCCGAATACTTCTGTCCCTCACTTGAACACCTGTCGAAACTACTGAAACTGTCCCCTACAATTGCTGGGGTGACCCTTCTTTCACTCGGAAATGGTGCCAATGACGTTTTCGCCAGCCTCGTCTCCTTCAAGGATAGTGGAACAAGCGACATTGGGTTCAATTCGGTACTTGGGGGTGCTTTCTTCGTGTCCTGCGTCGTGGTTGGAATTGTAAGCATCTCAATTCGTCGCAGGGGGATTCAAGTTAAAAAGCACGACTTTGTAAGAGATGTTTGTTTTCTTCTCGTGGTTCTTCTGTGCTTGCTTGTAATATTCATCACTGGTGGGATCAATTTATTTGGAGCAGTGGGTTTTACTTTGATATATATCGTCTATGTTTTTGTTGCTTATGTCTCGTCCACCTGCTGGGAGGGTGTTTCTGGAGATTCTGAACGGAATGGTAATCCATGTTATGACACAGACTTGACAGTGCCTCTTCTCATTGGCATGGAAGAAGGCGAATTTGATTGTAACGAGGAAAGTGATGGAGATTTTGGCCTGAGAATCGAGAAATGCTGCTGTATGAAATCATTGCTGTGCCAAAAGGCATTTTGGGTTCTACAGATGCCACTTGACTTGCCAAGGAGATTGACGATTCCTGTTATTTGTGAAGAAAGATGGTCTAAGCCATATGCAATTTCTTCAGTGACACTGGCACCTCTTCTGTTATCAGTAATATGGATCCCTCACCAAGAAAACGGTTTCTTCAACAACGATGATATAATCATTTATGGGATTGGATTGTTGATTGGGATCATATTTGGAGTAACTGCATTTTTCACAACAAAGAGCTCAAGGTCACCAAAAAATTGCCTGTTTCCATGGCTTGCAGGAGGGTTCATAATGAGTGTTACATGGAGTTACATTTCAGCCCAGGAATTAGTGGGATTGTTAGTTTCACTTGGCTGCATATGTGGGATAAGTCCTTCAATATTAGGGCTCACAGTTCTTGCCTGGGGGGATTCTCTCGGAGATTTGATGACAAATTTAACAATGGTTTTGAAGGGTGGATCGGAAGGCGCTCAAGTAGCCATATCAGGTTGTTATGCAGGTCCCATCTTCAACATTCTTATCGGCTTGGGCTTGTCTCTAATAATCTCTACTTGGTCGCAGTACCCATCATCTCGAGTGATTCCTTACGACCCATATCTCTTGGAGATGATGGCGTTTTTGGTTGGTGGATTGGTATGGGCACTCGTGGTTTTAACAAAAAGAGACATGAAGCTTGATGGAGTCTTAGGAGGAGGGCTCTTAATCATTTACTTCATTTTTCTGTTTCTGAGGCTGCTTCAGACGCTTGGGCTATTCCAGTTTCACACATTATAG 1710 0.4415 MPSSVSQSKSLFLNVSLLLLVCAFLIIYFHSSELPVRRNRAALGDGADHDCNIFHSLEGYRAKCLHLKSNGPCVSQGYIDYLYLFYCDLGRFPLLGYTLLFLWLLVLFYLLANTASEYFCPSLEHLSKLLKLSPTIAGVTLLSLGNGANDVFASLVSFKDSGTSDIGFNSVLGGAFFVSCVVVGIVSISIRRRGIQVKKHDFVRDVCFLLVVLLCLLVIFITGGINLFGAVGFTLIYIVYVFVAYVSSTCWEGVSGDSERNGNPCYDTDLTVPLLIGMEEGEFDCNEESDGDFGLRIEKCCCMKSLLCQKAFWVLQMPLDLPRRLTIPVICEERWSKPYAISSVTLAPLLLSVIWIPHQENGFFNNDDIIIYGIGLLIGIIFGVTAFFTTKSSRSPKNCLFPWLAGGFIMSVTWSYISAQELVGLLVSLGCICGISPSILGLTVLAWGDSLGDLMTNLTMVLKGGSEGAQVAISGCYAGPIFNILIGLGLSLIISTWSQYPSSRVIPYDPYLLEMMAFLVGGLVWALVVLTKRDMKLDGVLGGGLLIIYFIFLFLRLLQTLGLFQFHTL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0555 569 Pfam Sodium/calcium exchanger protein 404 557 IPR004837 GO:0016020|GO:0055085
Lele08g0555 569 Pfam Sodium/calcium exchanger protein 101 245 IPR004837 GO:0016020|GO:0055085
Lele08g0555 569 Gene3D - 341 557 IPR044880 -
Lele08g0555 569 Gene3D - 132 258 IPR044880 -
Lele08g0555 569 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 306 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0555 Lele-ChrLele08 3349971 3351680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0555 1 562 Antiporters AT5G17850 50.261 6.40e-160 466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0715 05 4214177 4215886 Lele08g0555 08 3349971 3351680 hybridization
Lele06g0550 06 3301617 3303671 Lele08g0555 08 3349971 3351680 hybridization