Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0547 ATGTTTGTGTTCAGCAGGATTTCTCTGCTCTTCAGGGTTTCTGCTCATGATCTTGGAAAACCAGGCTTCAATTCTGAGAGCATATGTGATCTTGAGGATATATTTGCTCAAACACTTTCTAGAATACCACAGAACTCTAGTTCATTACCTACATACCATTTACTAATGGCAGAAAAATTCTATGTTTCGAAGCTTTTGATTTTTGTGACACTTCTACTTTCTATCAATCATTCAGAGCAACTGCAATCCTCACTGCCTCAGACTCTTCTAAGAATCAAACGGCTTTTGAACTTTCCTTCTGCTTTAAGTAGCTGGAATAGCAGCACAGACTTCTGCAGCCCTGACTCAGATTCTTCTCTTACTGTAGTATGCTATGAAGATACCATCACGCAGCTTCATATAATAGGTGACAAGAGAGCTTCGCCACTTCCTAAGAATTTCTCAACAGATGCCTTTGTCGCAACACTAGCTAGGCTTCCCCATTTGAAAGTCCTCACACTGGTTTCTCTTGGCATCTGGGGTCCACTTCCTGGTAAGATTGCTCGATTGTCATCACTGGAAATAGTTAATATGAGTTCGAATTTTCTATATGGTGTCATCCCTCAGGAGCTTTCATTATTGTCAAATCTTCAAACTCTCATTCTTGATGACAACATGTTATCTGGTGAGCTTCCAGATTGGCTTGATTCTCTTCCAGCCTTGACAGTGTTAAGTCTAAAAAATAATCTGTTCAATGGGTCTGTACCTGATTCTTTGGGTAGCTTGGAAAATTTGAGGATTCTTTCACTTTCTCATAATCACTTTTCTGGAGCAGTACCCGATTTAAGGCATTTGACAAATCTTCAATTGCTGGAATTGGATGATAATGATTTTGGACCTCAGTTTCCTCGACTTGGTACCAAGTTGGTTAATCTTGTTCTAAGAAACAATAGTTTCCGATCCAGTGTCCCTGCTGAAGTGACCACGTTTCATCAGCTTGAGAGATTTGATATCTCATCAAATTCATTTGTGGGGCCATTCCACCCTGCATTGTTATCTCTCCCATCTATCACATATCTCAACATTTCTGGAAACCAACTCACTGGAATGCTTTTTGAAAATCAAACTTGCAGTTATGAACTCCAAGTCGTGGATCTTTCCTCGAATTTGTTGACTGGAAGCTTACCTGGATGTTTACAGTCAAAAAACAATGATAAGACTGTACTTTATGTTAGAAATTGTCTGCAAGATATGAATCAAAATCAGCACCTACTTCCCTTTTGTCATACTGAAGCCTTAGCTGTGGGAATATTACCTCAGAGTAAGAAACACAAGGATCAATCTAAGGTTGGCCTTTCTCTTGGGATAGTGGGAGGGATTCTTGGAGGAGTAGTGCTTGTTGCCTTGGTTTTCTTCATTATTAGAAGAGGAAATGTCAGAAGCAACAATAAGAATCCCCCAACAAGACTAATATCACAGAGTGCAACTCCTAAATACTCATCTAAGCATCTTTCTGATGCAAGGTACATATCTCAAACAATGAAGTTGGCGACAGTTGGCTTGCCAAGTTATCGAACTTTCTCTCTGGAAGAGATTGTGGCAGCGACAAACAATTTTGACACATCTGCTTTCATGGGTGAAAGTTCTCGGGGACAGATGTACAGAGGCCGGCTGAGGGATGGTTTTCTTGTTGCTATAAGATGCGTGAAAATGAAAAAAAGATACCGCATTCATTACTTTATGCACCACATAGAACTGATATCACAACTCAGGCATCGCCATTTAGTCTGTGCCCTAGGACACTGCTTTGAATATTACTTAGAAGATTCAACCGTCAGCAGAATATTTCTTGTCTTCGAATACGTTCCAAATGGCACACTCAGGAGCTGGATCTCAGCAGATAAGCGCTCAAGAAAATCACTTGGTTGGACCCAACGCATAGAAGCTGTGATTGGAGTAGCAAAGGGTATTCAGTATTTACACACTGGCATTGTCCCTGGTGTATATTCAAACATTCTCAAAACGACAGATGTTTTAATGGATCAGAATCTTGGTTCAAAAATCTGCACTTATAACCTGCCCTTTTTATCTGACATGGGAAAGGTTGAGCACGGAACTTCCTCCAGTGGCTCAAAAAACCCTAGTGTTGATAAAAGCGCAAAACATGAAGATAAGTCAGATATATACGATTTTGGAGCAATACTACAGGAAGTGATTCTGGGAAGGGCAGCAAAGTCAAGGAATGAAGCGGATGGTTTGAGGGTTCTGTTTCAAGCGAGCATAATAAGTGATGAGGAAGCTAGAAGGAGCATTGTAGATGCAGGAGTTCGCAAGTCATGCTTGGACCAATCGTTGAAGACGATGATGGAGATCTGTGCGAGGTGCCTGGCCAAAGATCCAGCAGAAAGGCCTTCCATCGAGGATGTTTTATGGAATTTGCAGTTTGCTTCTCAGGTTCAGGATGCATGGCGAGGGGAATCTCAAAGCAGTGAGGGATCTCCAGGCTCTCCTTTTGAACCTCGACGACTCACCTTCCATTAG 2520 0.4135 MFVFSRISLLFRVSAHDLGKPGFNSESICDLEDIFAQTLSRIPQNSSSLPTYHLLMAEKFYVSKLLIFVTLLLSINHSEQLQSSLPQTLLRIKRLLNFPSALSSWNSSTDFCSPDSDSSLTVVCYEDTITQLHIIGDKRASPLPKNFSTDAFVATLARLPHLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNFLYGVIPQELSLLSNLQTLILDDNMLSGELPDWLDSLPALTVLSLKNNLFNGSVPDSLGSLENLRILSLSHNHFSGAVPDLRHLTNLQLLELDDNDFGPQFPRLGTKLVNLVLRNNSFRSSVPAEVTTFHQLERFDISSNSFVGPFHPALLSLPSITYLNISGNQLTGMLFENQTCSYELQVVDLSSNLLTGSLPGCLQSKNNDKTVLYVRNCLQDMNQNQHLLPFCHTEALAVGILPQSKKHKDQSKVGLSLGIVGGILGGVVLVALVFFIIRRGNVRSNNKNPPTRLISQSATPKYSSKHLSDARYISQTMKLATVGLPSYRTFSLEEIVAATNNFDTSAFMGESSRGQMYRGRLRDGFLVAIRCVKMKKRYRIHYFMHHIELISQLRHRHLVCALGHCFEYYLEDSTVSRIFLVFEYVPNGTLRSWISADKRSRKSLGWTQRIEAVIGVAKGIQYLHTGIVPGVYSNILKTTDVLMDQNLGSKICTYNLPFLSDMGKVEHGTSSSGSKNPSVDKSAKHEDKSDIYDFGAILQEVILGRAAKSRNEADGLRVLFQASIISDEEARRSIVDAGVRKSCLDQSLKTMMEICARCLAKDPAERPSIEDVLWNLQFASQVQDAWRGESQSSEGSPGSPFEPRRLTFH 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0547 839 ProSiteProfiles Leucine-rich repeat profile. 257 279 IPR001611 GO:0005515
Lele08g0547 839 SUPERFAMILY Protein kinase-like (PK-like) 511 810 IPR011009 -
Lele08g0547 839 Gene3D Ribonuclease Inhibitor 298 416 IPR032675 -
Lele08g0547 839 Gene3D Ribonuclease Inhibitor 84 297 IPR032675 -
Lele08g0547 839 MobiDBLite consensus disorder prediction 816 839 - -
Lele08g0547 839 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 82 300 - -
Lele08g0547 839 Gene3D Transferase(Phosphotransferase) domain 1 615 821 - -
Lele08g0547 839 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 615 822 - -
Lele08g0547 839 Pfam Protein tyrosine and serine/threonine kinase 537 803 IPR001245 GO:0004672|GO:0006468
Lele08g0547 839 SUPERFAMILY L domain-like 89 408 - -
Lele08g0547 839 PANTHER UNNAMED PRODUCT 145 736 - -
Lele08g0547 839 SMART LRR_typ_2 255 278 IPR003591 -
Lele08g0547 839 SMART LRR_typ_2 347 367 IPR003591 -
Lele08g0547 839 SMART LRR_typ_2 231 254 IPR003591 -
Lele08g0547 839 SMART LRR_typ_2 207 230 IPR003591 -
Lele08g0547 839 ProSiteProfiles Protein kinase domain profile. 532 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0547 839 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 505 614 - -
Lele08g0547 839 Pfam Leucine rich repeat 225 268 IPR001611 GO:0005515
Lele08g0547 839 Gene3D Phosphorylase Kinase; domain 1 503 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0547 Lele-ChrLele08 3311887 3316739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0547 98 827 Miscellaneous Gene Families AT3G03770 60.598 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele08g0547 PK_Tyr_Ser-Thr 2e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0709 05 4178537 4183107 Lele08g0547 08 3311887 3316739 hybridization
Lele06g0543 06 3251444 3261696 Lele08g0547 08 3311887 3316739 hybridization