Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0525 ATGAGGAGTCCAAGGGTAAAAGGCCAGATCACGCCATGTTGTAGCAAGGAAGGGATAAAGAGAGGACCATGGACGCCGGAGGAGGATGAGGTTCTGGCCAATTTCGTCAAGAAGGAAGGAGAAGGACGGTGGCGCACGCTTCCCAAGCGGGCGGGGCTGCAACGCTGCGGCAAGAGCTGCCGTCTCCGATGGATGAACTACCTTCGTCCCTCCGTCAAGAGAGGCCATATCGCTCCCGATGAGGAAGATCTCATCCTTCGCCTCCACCGCTTGCTGGGCAACAGGTGGTCTCTGATAGCTGGGAGGATACCTGGAAGGACCGATAACGAGATTAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATAAGTCAGGGAATAGACCCTAGGACTCACAAGCCCTTACTCACTTTGGACAATAATTCCAAATCTCAACAAGCATATCATGAATCCAATACAAGCACATACAGTAATCCTCAATCATCTCCACCAGAGATTGTTAATCAGACAGATGCTATCCAAAATAACAGTACTTCTGTCCCTGTTGGGAATAATTTGGGAACAAGTAGCGACAAAGTAGTGAGGCTCGAAAATGGGGTTGAGGTTGAAGAGGAGGTTGGGAAGATCATGGGGGAGGAAGATACACTATCTTCGTTTCTGGAATCTTTGATCAACGACCACGAAGTACCTGGGAATCAACAGACGCAGGCTGTCGACCACCACGTGTTTCCTGTTCCACCGCCACATCCAGTGGTGGCTTCTTATTCGCAGCAATTTTTCGATCTTTCCTTTTGGGAAGCTGAATTCCAGAGTTTTGGAGGAGATCAACAGTATGGTTGCCCCTTCAGGTAA 855 0.4936 MRSPRVKGQITPCCSKEGIKRGPWTPEEDEVLANFVKKEGEGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLLTLDNNSKSQQAYHESNTSTYSNPQSSPPEIVNQTDAIQNNSTSVPVGNNLGTSSDKVVRLENGVEVEEEVGKIMGEEDTLSSFLESLINDHEVPGNQQTQAVDHHVFPVPPPHPVVASYSQQFFDLSFWEAEFQSFGGDQQYGCPFR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0525 284 SMART sant 73 121 IPR001005 -
Lele08g0525 284 SMART sant 20 70 IPR001005 -
Lele08g0525 284 Gene3D - 78 156 - -
Lele08g0525 284 CDD SANT 23 68 IPR001005 -
Lele08g0525 284 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Lele08g0525 284 CDD SANT 79 119 IPR001005 -
Lele08g0525 284 Gene3D - 21 73 - -
Lele08g0525 284 MobiDBLite consensus disorder prediction 144 168 - -
Lele08g0525 284 FunFam transcription repressor MYB5-like 78 147 - -
Lele08g0525 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Lele08g0525 284 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Lele08g0525 284 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Lele08g0525 284 ProSitePatterns Fructose-bisphosphate aldolase class-II signature 2. 203 214 IPR000771 GO:0005975|GO:0008270|GO:0016832
Lele08g0525 284 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 11 189 - -
Lele08g0525 284 Pfam Myb-like DNA-binding domain 79 119 IPR001005 -
Lele08g0525 284 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Lele08g0525 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Lele08g0525 284 FunFam Myb transcription factor 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0525 Lele-ChrLele08 3187394 3188371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0525 6 227 MYB Transcription Factor Family AT3G13540 60.811 8.06e-84 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g0525 Myb_DNA-binding 5.6e-15 CL0123