Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0515 ATGCCGCTAATCCAAATACGATCGATCCATGGGAGAATCCAGATTGAGTATCGTGCAGTCGTGGGGAAATCATTTCGCCAAACGACCATGCCGTTTGACAAATTAACGTTAGCTGTATCAGTAAGCCTCGTCACTGGCGTGGAGATAAGAGGACGACTTCTACACGTAGCTAAGAATATGACGATCCGACTCCGATCGTCTTCGGAAGGGACGGCTTCTTTAGATGCTTTTAGTGCTACCTCTAGGTTTTCTGCTGTTTCTGGGGCGACTCAAGTGGGTTATGATTTGAATGGGGAGAGGATGCCTGAGTTGAGAAGTGGAGCTAGAAGATCGAAACGACTTGGTGATCTTCAGCCTGCCCCACTGCCTGTTGATCAAGGAGAGAACTGTGCACAACCTGCCCCAACTAGAGCCAGGAGGAGAGTTGGAGGTGGAAGAGGACGTGGTAATGTCACAGCTGTAGCAAAAGGACCTTCACCAGCAGTACCCACAAGGCGAACTGCAGCTGGTCGAGGTCGGGGAGTAAGATTAATTAATCTTGACCCTGAACCTTGTGAGGTCCTTCCTGATCCCGTTGCACTAGGAGCCCCAGAACCCCTTGGTGTTGAGGCGGTGGCCAACAATAAAATTGTGATGGAAGGTGGAAGTGCAGACAAGGTGGTTGGAGCTGAAGAGGAAGCTACCACGACCCCTATTCCTGAGAGGGTTCAAGTTGGTAGTTCTCCTATGTATAAGATTGAAAGGAAATTGGGTAAGGGTGGTTTCGGTCAAGTGTATGTTGGCAGAAGGGTAAGTGGCGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAGCACAGAAATAGTAAAGGTTGCAATTATGGACCTCCTTATGAGTGGCAGGTCTACAATACTCTGAATGCATGCTATGGTATTCCCTCGGTTCATTACAAGGGTTGTCAAGGAGATTTTTATATTCTGGTGATGGACATGCTTGGACCCAGTCTTTGGGATGTATGGAATTCAGTTGGCCAATCGATGTCGCCAAATATGGTTGCTTGCATTGCAGTGGAAGCAATATCAATTCTTGAGAAGCTCCACATGAAAGGGTTTGTGCATGGAGATGTAAAACCAGAAAACTTCTTACTAGGTCAACCTGGATCAGCTGATGAGAAGAAACTATATCTTATCGATCTTGGGTTGGCTTCAAGATGGAAAGATGCATCATCTGGTCAGCATGTTGAATATGACCAAAGACCTGATATTTTCAGGGGAACAATAAGGTATGCCAGCGTGCATGCACATTTAGGTAGGACAGGAAGTCGAAGGGATGATCTTGAGTCACTGGCCTACACGCTAATATTTCTCATAAAAGGGAGGTTACCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTCGTCTGTAAGAAGAAGATGTCCACTTCTCCAGAGTTAATGTGCTGCTTTTGTCCTGCCCCATTCAAACAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTTATATCTTTTTTTGAAAGCTTGATTGAACCATGTGTACCATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAGAAGCGTGGGAGGATGCTTATTAACCTGGAAGAAGATGAGCAGCCAAAGAAGAAAGTACGCATGGGGAGTCCTGCGACACAGTGGATTTCAGTTTATAATGCTCGTCGTCCCATGAAGCAGAGGTATCATTACAATGTAGCAGACACAAGGCTTCGTCAGCATGTAGACAAGGGAAATGAGGATGGGTTGTATATCAGCTCTGTGGCCTCCTCAACAAATCTATGGGCCCTAATCATGGATGCAGGGACAGGTTTTTCTTCCCAGGTGTATGAATTGTCACCCGTCTTCCTGCATAAGGACTGGATTATGGAACAGTGGGAGAAAAATTATTATATCAGTTCAATAGCTGGTGCAACTAATGGGAGTTCCTTGGTCGTCATGTCCAAAGGAACTCCTTACACACAGCAATCCTACAAAGTGAGCGAATCATTTCCTTTCAAGTGGATTAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAGTCGCTGGGGTGTTGTAATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTCGACTTTTTATATCCAAGTGAAGGAATACATCGAAGATGGGAAGGTGGCTACCGGATAACATCTATGGCTGCTACTGCTGAACAGGCAGCCTTTATACTGAGCATACCAAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTGCGTACCTCTGCCTTCCCTAGCACCCATGTAAAGGAAAAATGGTCCAAGAATCTCTATATTGCATCAATTTGTTACGGCCGGACTGTGTGCTAG 2418 0.4566 MPLIQIRSIHGRIQIEYRAVVGKSFRQTTMPFDKLTLAVSVSLVTGVEIRGRLLHVAKNMTIRLRSSSEGTASLDAFSATSRFSAVSGATQVGYDLNGERMPELRSGARRSKRLGDLQPAPLPVDQGENCAQPAPTRARRRVGGGRGRGNVTAVAKGPSPAVPTRRTAAGRGRGVRLINLDPEPCEVLPDPVALGAPEPLGVEAVANNKIVMEGGSADKVVGAEEEATTTPIPERVQVGSSPMYKIERKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNACYGIPSVHYKGCQGDFYILVMDMLGPSLWDVWNSVGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGSADEKKLYLIDLGLASRWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFESLIEPCVPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRMGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLYISSVASSTNLWALIMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWEGGYRITSMAATAEQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0515 805 FunFam Casein kinase 1-like protein 216 564 - -
Lele08g0515 805 ProSitePatterns Protein kinases ATP-binding region signature. 250 281 IPR017441 GO:0005524
Lele08g0515 805 Pfam Protein kinase domain 244 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0515 805 MobiDBLite consensus disorder prediction 113 167 - -
Lele08g0515 805 PANTHER CASEIN KINASE-RELATED 237 769 - -
Lele08g0515 805 ProSiteProfiles Protein kinase domain profile. 244 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0515 805 SUPERFAMILY Protein kinase-like (PK-like) 244 526 IPR011009 -
Lele08g0515 805 CDD STKc_CK1 243 518 - -
Lele08g0515 805 Gene3D Transferase(Phosphotransferase) domain 1 214 561 - -
Lele08g0515 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Lele08g0515 805 SMART serkin_6 244 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0515 Lele-ChrLele08 3128896 3136889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0515 317 518 MAP Kinase Kinase Kinase AT3G27560 21.359 4.40e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele08g0515 Pkinase 9.7e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0515 08 3128896 3136889 Lele08g0515 08 3128896 3136889 ECH
Lele06g0507 06 3076865 3083870 Lele08g0515 08 3128896 3136889 hybridization