Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0506 ATGGAGGGTGGTGGGCGATGGTGCAACACGTGCTCAAACGTGGTGAATCCAACGATGAGGGAAGGAGAGAACAACAAATGCCCAGTTTGTGGGTCAGAATTTACAGAGGCAACAATGGAGAGCCTGAGATCACCGGATCAAAACGAAGGAAGCGACTTGATGAGATCGGCTTCTGTGTTCTCTCTTTACGCGCCAATATTACTGGGCTTGATGAGTGCTCTCAGACCTGCTCTTGCAACCATCAGCAACAACAACAACAATGGTGGTTCCAGTTCCAGTTCAAGGGAGGAGGAAGACGGCGACGAGCAAGATCAGATAGAACAGCACGGTGACCTTGTGGGGAGAAGAAGGAGAAGAACGTCGTCCACTTCTCTCATGCTTGTCTTTCGTCGTCTCCACGATAGGATGGCGACGCAGCCGGAATCTGATCAGAATAATAATAACACAGAAAACGATCATAGAAACAATAACGTTGGTGGTGGTAATAATAATAATAATAACGTGAATCTAAACGTTGTTGTGATTGATCCGTTCAACGAAGAGGCCTTGATTCTGAGAGGTCCTTCACAGGCTAGAAGTAGTACTCCGTTAATCGAAAATCCGATGGGGTCTCTAGGTGATTTTCTGGAGGGACCTGGGTTTGGGTTATTACTGCAACATTTGACACAGAATGATGAGCCTAACAGGTATGTGAATAATGTGAACCAGCCGGCGCAGAAGGCGGCGATAGAAGCGATGCCGACGGTGACGACGGAGGAGAGTATGCAGTGCATAATATGTTTGGAGGATGCAGAGATTGGGAGTGAAGTGAAGGGGATGCCGTGTGGGCATAAGTTTCACAGTGACTGCATTATCTCGTGGCTGAAACTTCGGAGTTCTTGCCCGGTTTGCAGGTTTCGGATGCCGTCCGACGATACCAAGGTGGAAGCCAACGGCGGACGTCGGAATGAAGGCGATCCGAGTAATGATCAGGTGATGGATAGAGAACAGAGAATGAGTTTTGGAAGAAGGAACTGGCTCTCCATATTGCAGCCATTTGATTACTTTCTTCCTTCACCTTGA 1062 0.4812 MEGGGRWCNTCSNVVNPTMREGENNKCPVCGSEFTEATMESLRSPDQNEGSDLMRSASVFSLYAPILLGLMSALRPALATISNNNNNGGSSSSSREEEDGDEQDQIEQHGDLVGRRRRRTSSTSLMLVFRRLHDRMATQPESDQNNNNTENDHRNNNVGGGNNNNNNVNLNVVVIDPFNEEALILRGPSQARSSTPLIENPMGSLGDFLEGPGFGLLLQHLTQNDEPNRYVNNVNQPAQKAAIEAMPTVTTEESMQCIICLEDAEIGSEVKGMPCGHKFHSDCIISWLKLRSSCPVCRFRMPSDDTKVEANGGRRNEGDPSNDQVMDREQRMSFGRRNWLSILQPFDYFLPSP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0506 353 MobiDBLite consensus disorder prediction 82 119 - -
Lele08g0506 353 FunFam E3 ubiquitin-protein ligase RNF181 227 304 - -
Lele08g0506 353 MobiDBLite consensus disorder prediction 139 165 - -
Lele08g0506 353 ProSiteProfiles Zinc finger RING-type profile. 257 298 IPR001841 -
Lele08g0506 353 MobiDBLite consensus disorder prediction 136 165 - -
Lele08g0506 353 SMART ring_2 257 297 IPR001841 -
Lele08g0506 353 Pfam Ring finger domain 256 298 IPR001841 -
Lele08g0506 353 SUPERFAMILY RING/U-box 246 303 - -
Lele08g0506 353 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 134 302 - -
Lele08g0506 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 304 IPR013083 -
Lele08g0506 353 MobiDBLite consensus disorder prediction 305 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0506 Lele-ChrLele08 3078003 3079064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0506 172 318 C3H Transcription Factor Family AT1G26800 33.784 2.77e-21 89.0