Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0505 ATGTACTATCATCAGCAACATCAAGCAAAGAATATTCACTCTTTAAGGATGCCCAACCCTTCTGAGAGGCATATGATTGTTCATGAAGGAGGTGGAACTGGAGATTCAGGACTTATCCTCTCAACTGATGCTAAGCCAAGACTAAAATGGACACCAGATCTCCATGAACGTTTTGTAGAAGCAGTCAATCAGCTAGGAGGACCAGACAAAGCTACACCAAAAACCGTACTGAAACTTATGGCGATTCCTGGACTTACTTTATACCACTTAAAGAGTCATCTACAGAAATACAGATTCAGTAAAAATCTGCATGGACAGGCCAATAGTGGAACCTATAGAAACGAAGCAGCGGCAGGCCAAATGTCTGAGACAAGTGGAGTTCATACGAAAAACTTAAGCATCAGACTTCAGCCAAACAAGAACTTAGAAATAAATGAGGCACTACAGATGCAAATTGAAGTGCAAAGAAGGCTGCATGAGCAGCTCGAGGTACAGCGACACTTGCAGCTTCGTATAGAGGCTCAAGGGAAGTATCTCCAAGGAGTGCTGGAGAAAGCCCAAGAGACACTGGAAAGACAGAATCTTGGCACAGCAGGACTTGAAGCTGCCAAGGTTCAACTCTCTGAACTGGCATCCAAAGTATCAACTCAATACATAGAGCCTGCATTTTCAGAGCTGAAAGAATTACAGGCACTATGGCCTCAGCAAGCACAAGTGACCAAAACCACCAATTGTTCAATGGATAGCTGCTTGAAATCTAGTGAAGGATCTCAGCAGAGAGACCAAGACATGCATTACGCGGGTTTAAATTTGATATTATGTGATGGAACTCCATTTTTAAGATCAAAAGAGGGTGCTCCAGAGCCTATTCTTCTCAAGTCTGATCTCACATTATGTGATGACCAGCTGCAGGAGAAAATGCTGTTTCTTTCCCCCTCAAACGATGATGCACATAAAAGAAACTCTAAACTCATATCCATGAATGTTGGACTTGAAGGAGAAGAAAGCTTGGGGAAGGAAGATTTGAAGTTAGAAGAAGAAAGATGGTTGAGAAAGGGAAGAGCTGATGAAAATTGGGTTGTGCCAGGTAAACAGAACTATGAGAAAATTTCTCAAGACTACAGGCTGTCTAACTTGGAAACCACGCTAGACCTAAATGGTCATGATAAAAATAATGCTTCTTCTAACTGTCAACCGTTTGACTTGAATGGATTTAGCTGGAATTGCTAG 1230 0.4203 MYYHQQHQAKNIHSLRMPNPSERHMIVHEGGGTGDSGLILSTDAKPRLKWTPDLHERFVEAVNQLGGPDKATPKTVLKLMAIPGLTLYHLKSHLQKYRFSKNLHGQANSGTYRNEAAAGQMSETSGVHTKNLSIRLQPNKNLEINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQGVLEKAQETLERQNLGTAGLEAAKVQLSELASKVSTQYIEPAFSELKELQALWPQQAQVTKTTNCSMDSCLKSSEGSQQRDQDMHYAGLNLILCDGTPFLRSKEGAPEPILLKSDLTLCDDQLQEKMLFLSPSNDDAHKRNSKLISMNVGLEGEESLGKEDLKLEEERWLRKGRADENWVVPGKQNYEKISQDYRLSNLETTLDLNGHDKNNASSNCQPFDLNGFSWNC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0505 409 FunFam Myb family transcription factor 44 102 - -
Lele08g0505 409 Coils Coil 145 165 - -
Lele08g0505 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Lele08g0505 409 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Lele08g0505 409 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 19 279 IPR044848 GO:0003700
Lele08g0505 409 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Lele08g0505 409 Gene3D - 44 102 - -
Lele08g0505 409 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 99 IPR006447 GO:0003677
Lele08g0505 409 Pfam MYB-CC type transfactor, LHEQLE motif 143 189 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0505 Lele-ChrLele08 3072651 3074635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0505 77 408 G2-like Transcription Factor Family AT3G04030 48.547 7.69e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele08g0505 Myb_DNA-binding 3.7e-08 CL0123