Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0502 ATGACCATGAGACACCCTCGATCCAATCTCCCACCTGGTTTTAGGTTCCACCCCACCGACCAAGAGCTCATCCTTCACTATCTCAGCAAGAAGATCTCTTCCCTCCCCCTCCCCGTCTCCGTCATTGCCGAGGTCGATATTTACAAGTTCGACCCTTGGGATTTACCAGGAAAAGCTGCGTTTGGGGAGAAAGAATGGTACTTCTTCAGTCCCAGGGACCGAAAGTACCCGAACGGAGCGAGGCCAAACAGGGCAGCTGGTTCTGGGTACTGGAAGGCCACTGGTACTGACAAGAACATCGTATCCCCATCATTGGCCGGTGGAGCACAGGACAGCATTATTGGTGTCAAGAAGGCTCTCGTTTTCTACAAAGGAAAGCCCCCAAAAGGTCTCAAGACCAATTGGATCATGCACGAATATCGCCTCGCTCACACCCACAACAAACCCATTAAGCTCCGAGACACCTCCATGAGGCTTGATGATTGGGTTCTGTGCCGGATATACAACAAGTCCAAGCATGACACGTCGTCGTCCCCGGAGGCTCTGCTCATGGCTGGTGATCAGGCGCAAGATCAGCATCTTCTCAGACAAGCCCTTTTGCCAACCTCAACCAGCACTACCATGAACGCTCATCTTCCTCCTCACGCCACCACGCTCACATCCAACAAGTCTCCGTCTTTCTCTAATCTGTTAGATGCCATGGACTACTCTATGTTGAGCAGCTTCTTGTCTGATCAGACCCACCCCAACAACCCAACTGTTCCGGCCTCCGTCCCCGGTGCCGACGGCAGTGTTCTGGACCATCACCACTTAACCGTGCCTCCATTGAGCGGTTCGGGCCGCAGACGGCAGCTTTCTGACGTGGACGACGATGACTTGTACCCATCCAAGAAATACCAGATGACTTCTTGCAGCTTCCCAGAAAACACCAATCATCAGTACGAAAATAGTAATCCACAATGGAACTTCCTCCACAAACAGCCATTGTTGACTCAGCAATTGCTGCTGGGTCCTCATCTTCGATTTCAGGGATAA 1035 0.5198 MTMRHPRSNLPPGFRFHPTDQELILHYLSKKISSLPLPVSVIAEVDIYKFDPWDLPGKAAFGEKEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKNIVSPSLAGGAQDSIIGVKKALVFYKGKPPKGLKTNWIMHEYRLAHTHNKPIKLRDTSMRLDDWVLCRIYNKSKHDTSSSPEALLMAGDQAQDQHLLRQALLPTSTSTTMNAHLPPHATTLTSNKSPSFSNLLDAMDYSMLSSFLSDQTHPNNPTVPASVPGADGSVLDHHHLTVPPLSGSGRRRQLSDVDDDDLYPSKKYQMTSCSFPENTNHQYENSNPQWNFLHKQPLLTQQLLLGPHLRFQG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0502 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 240 - -
Lele08g0502 344 Pfam No apical meristem (NAM) protein 11 142 IPR003441 GO:0003677|GO:0006355
Lele08g0502 344 ProSiteProfiles NAC domain profile. 10 170 IPR003441 GO:0003677|GO:0006355
Lele08g0502 344 MobiDBLite consensus disorder prediction 272 293 - -
Lele08g0502 344 Gene3D NAC domain 19 175 IPR036093 GO:0003677|GO:0006355
Lele08g0502 344 SUPERFAMILY NAC domain 5 170 IPR036093 GO:0003677|GO:0006355
Lele08g0502 344 FunFam NAC transcription factor 56 19 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0502 Lele-ChrLele08 3049100 3050319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0502 1 344 NAC Transcription Factor Family AT3G04070 47.945 7.03e-101 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g0502 NAM 1.1e-39 No_clan