Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0484 ATGAGTTTTCAAGATCTTCAGGGCGGGCCCAGGCGACCTGCTTCACGAACTCAATCGCCGTCGCAGGCTCTGGCTGCCGGAATTTTCCAGATCAATACAGGCGTTGCCAATTTCCGACGACTCGTTGATTCCATTGGAACCGTCAAAGACACCGTCGGTAACCGCCAGAAGCTGCACGATACGAGGCAGCGGATATTGCAGCTGGTGAAGGATACTTCTGCAAAACTCAAAGCCTTGAGCGATTCCGATCTTGCTGCCCATGCCGATTCTGGTAAGAAAATTGAAGATGCTAAGCTGGCGAGAGATTTCCAAACCACTTTACAAGAATTCCAGAAAGTGCAGCAGCTTGCTTCTGAGCGCGAATCTACCTACCTTCCTGCTGGTCCTGCTTCTTTACTAGCAAGCTCTGGCTCTGTTGGAGAATCAACTGACATAGGTCAGGAAAGCCAACCTTTTATCCGGGAACAAAAAAGGCAGGAGATACGCTTATTAGATAATGAAATCGCATTCAATGAATCCATGGTTGAAGAAAGAGAACAGGGCATCAGGGAGGTAGAGGTGCAAATTGGACAAGTAAATGAAATATTCAAGGACCTAGCCGTTCTGGTTCATGAGCAGGGGGTGGTTATTGATGATATTCAATCAAATATTGATACTTCTGCGGGTGCAACAACCCAAGCTACTACAGAGTTAGCCAAGGCTTCCAAAAGTATGAAATCTAAATCTTCATGGTGTTGGTGGGTGCTTATAATTTTTGTTATAGTGGTGGTCATCGTGCTTGTTGTTCTCATTATTTAG 798 0.4586 MSFQDLQGGPRRPASRTQSPSQALAAGIFQINTGVANFRRLVDSIGTVKDTVGNRQKLHDTRQRILQLVKDTSAKLKALSDSDLAAHADSGKKIEDAKLARDFQTTLQEFQKVQQLASERESTYLPAGPASLLASSGSVGESTDIGQESQPFIREQKRQEIRLLDNEIAFNESMVEEREQGIREVEVQIGQVNEIFKDLAVLVHEQGVVIDDIQSNIDTSAGATTQATTELAKASKSMKSKSSWCWWVLIIFVIVVVIVLVVLII 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0484 265 CDD SNARE_Qa 175 231 - -
Lele08g0484 265 Pfam SNARE domain 209 260 IPR000727 -
Lele08g0484 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 172 234 IPR000727 -
Lele08g0484 265 Gene3D - 12 128 - -
Lele08g0484 265 Gene3D - 165 265 - -
Lele08g0484 265 FunFam Syntaxin-22 like 165 265 - -
Lele08g0484 265 Pfam Syntaxin-like protein 26 124 IPR006011 GO:0016020
Lele08g0484 265 SMART tSNARE_6 167 234 IPR000727 -
Lele08g0484 265 SUPERFAMILY t-snare proteins 18 227 IPR010989 GO:0016020|GO:0016192
Lele08g0484 265 MobiDBLite consensus disorder prediction 1 21 - -
Lele08g0484 265 PANTHER SYNTAXIN 22 255 IPR045242 -
Lele08g0484 265 FunFam Syntaxin-22 like 15 128 - -
Lele08g0484 265 SMART SynN_4 8 122 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0484 Lele-ChrLele08 2962647 2964634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0484 1 252 SNARE and Associated Proteins AT5G46860 57.031 4.73e-93 273