Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0481 ATGAACCCATCAACTTCGGCATCGCCTTCCAAGGCGAAGAGGAAGCAAACAGCGACAACAAGCGCCAAGACACCAGAACAACAACATGGAACGGCGTGGGGAGGAAGGTACCTGGGTGTTCGGAGAAGGCCGTGGGGAAGATACGCGGCGGAGATTAGAGACCCTTCCACCAAAGAAAGGCATTGGCTTGGCACCTTCGAGGAAGCTGCCTTAGCCTACGACAGGGCAGCACGCTCCATCCGTGGTTCTCGCGCTCGAACCAACTTCGTATACTCAGATACTCCTCCTGGCTCCTCCGTGACTCCCATTATCTCCCCTGATGAAGAAACCCACCAGAACCACGACTTTTCGTCTCTCTTCGCTTCGAACTTGCTCGCTCAACAACCCAGCCCTACTGATCGGCCGACGGAATGCGCCCTCTCGGGCGGGTTTTTGGGCATAAAGGATGCTGATGCCTGGGCAGTTCCTTCGGCGATTTATTCCCAACAATATCAATCACCCACGATGGACGTGCATAACGTGCCCCACTTCCGCCAACTGTATGATGATAGCAACACTGAACTCCCTCCATTGCCACCGGATATTACAAGCTCCATAGGTTACGAAATGGGTCACGAGTTTTATGATAACAGCTTTGGATATTCGGAGCAAAGTACAGGAACTGGATTTGAACCATCAACGAGCTGGCCTTCGTGCTCGTCTATGGGCTTGGATTCGGGCGATTACATGCATAGCCCACTGTTGAGCACAATGCCAACGGTGTCAGAAAAGTTGCCGGAGGGTTTTGAATTGGGAAGTCCCTCGTATTTCTTCCGATTCTGA 822 0.5255 MNPSTSASPSKAKRKQTATTSAKTPEQQHGTAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFEEAALAYDRAARSIRGSRARTNFVYSDTPPGSSVTPIISPDEETHQNHDFSSLFASNLLAQQPSPTDRPTECALSGGFLGIKDADAWAVPSAIYSQQYQSPTMDVHNVPHFRQLYDDSNTELPPLPPDITSSIGYEMGHEFYDNSFGYSEQSTGTGFEPSTSWPSCSSMGLDSGDYMHSPLLSTMPTVSEKLPEGFELGSPSYFFRF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0481 273 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Lele08g0481 273 PRINTS Ethylene responsive element binding protein signature 72 92 IPR001471 GO:0003700|GO:0006355
Lele08g0481 273 Pfam AP2 domain 37 82 IPR001471 GO:0003700|GO:0006355
Lele08g0481 273 MobiDBLite consensus disorder prediction 1 28 - -
Lele08g0481 273 SUPERFAMILY DNA-binding domain 36 91 IPR016177 GO:0003677
Lele08g0481 273 Gene3D AP2/ERF domain 35 91 IPR036955 GO:0003700|GO:0006355
Lele08g0481 273 SMART rav1_2 36 96 IPR001471 GO:0003700|GO:0006355
Lele08g0481 273 CDD AP2 36 89 IPR001471 GO:0003700|GO:0006355
Lele08g0481 273 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 148 - -
Lele08g0481 273 ProSiteProfiles AP2/ERF domain profile. 36 90 IPR001471 GO:0003700|GO:0006355
Lele08g0481 273 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0481 Lele-ChrLele08 2946652 2947473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0481 19 263 AP2-EREBP Transcription Factor Family AT5G13910 41.860 3.01e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g0481 AP2 8.3e-09 CL0081