Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0477 ATGCTTACGCCTTTCTGGGAATCTGCCCAGTGTCTTAACAACATTTTGAAAAGGCCTATTGATTTTGGACCGAGCAGTTCAGGGAATTCTCTTGTATCATCAACTGGAACGTCGAAGCTCAGTCTTGATCTAAAGGGGTTTATGTCAAGGATAGATAACTGGCTGTCTGAGATCCCACGCTATCATTCATCTGGAGATACAAGCTCTGCAGATTTGACAGAAATTCCGCTTTGTTATAACTGGTCTCTTGCAGCGATAGTAGGAGGAGCTGCAGGGGCCGTGGCATTGGTAGGGATAGTTATAGCATTCATATGCTTCTGCCTATCTCGCAGGAGGAGTGTCTCAAGGACTTCAGAGACAGGCTCCTCTGATCCTTCGCAAGTGGGAAGACATGGTGGGATTGAGTTGATTTTACGAGATACTAGGCGGTTTGAGATGGAAGAACTATCTCAGGCTACAAAGAATTTCAGTGACAAAAATTTGATCGGAGAAGGCAAGTTTGGGGAGGTTTACAAAGGCTTACTTCATGATGGTATACTTGTGGCCATCAAAAAGCGGCAGGGACTTCGGAGCCAGGAATTTGTTGATGAGGCTCGCTACCTCTCATCCATTCAGCATCGGAATCTTGTAACTCTTTTGGGCTACTGCCAGGAACAAAATCTGCAGTTTCTTATATACGAATATGTGCCTAATGGGAGCGTCTCTAGTCACTTGTATGGTGCTGGTCAACAATCGAAAGAGAAGCTAGAATTCAAGCTTAGACTTTCAATAGCTCTAGGTGCAGCTACAGGTTTGGCTCATATTCATTCCTTGAGCCCCCGTTTGGTGCATAAGAATTTCAAAACAGCCAATGTTCTGGTGGATGAAAATTTCATTGCTAAGGTGGCAGATGCTGGACTGCGTAATTTCCTGGGAAGAGCTGATATTGCAGGCCCATCTTCTCAAGTTGCAGCAGATGAGATATTCCTTGCTCCCGAGGTTAGAGAGTTCAGACGATTTTCTGAGAAGAGTGATGTATACAGTTTTGGGGTATTTTTGTTGGAACTATTAAGTGGGAAGGAAGCAACAGAATCTCCAACTTCAGACTCTAATCAGAATCTAGTTGAATGGGTGCAAGTTAATGAAGATCATCGCATTATGTCTAACATCATTGATCAGAGATTGGGGAGCTTCACAGCGGAAGGCATGGAAGAGTTTATCTTGCTGGTAGCTCGATGTTTGAGTCCTTCAAGTGAGAGAAGACCTTCCATGAGTTATGTTGTAATGGAACTTGAACGGATTCTTGACAAGGAAATGAACTTGACAACAATGATGGGCGAAGGCACCCCAACTGTGACCCTTGGGAGTCAGTTATTCAAAGCAACAAGGTAA 1371 0.4406 MLTPFWESAQCLNNILKRPIDFGPSSSGNSLVSSTGTSKLSLDLKGFMSRIDNWLSEIPRYHSSGDTSSADLTEIPLCYNWSLAAIVGGAAGAVALVGIVIAFICFCLSRRRSVSRTSETGSSDPSQVGRHGGIELILRDTRRFEMEELSQATKNFSDKNLIGEGKFGEVYKGLLHDGILVAIKKRQGLRSQEFVDEARYLSSIQHRNLVTLLGYCQEQNLQFLIYEYVPNGSVSSHLYGAGQQSKEKLEFKLRLSIALGAATGLAHIHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRADIAGPSSQVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATESPTSDSNQNLVEWVQVNEDHRIMSNIIDQRLGSFTAEGMEEFILLVARCLSPSSERRPSMSYVVMELERILDKEMNLTTMMGEGTPTVTLGSQLFKATR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0477 456 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 92 433 - -
Lele08g0477 456 ProSitePatterns Protein kinases ATP-binding region signature. 162 185 IPR017441 GO:0005524
Lele08g0477 456 FunFam Protein kinase superfamily protein 229 441 - -
Lele08g0477 456 SUPERFAMILY Protein kinase-like (PK-like) 141 435 IPR011009 -
Lele08g0477 456 Gene3D Phosphorylase Kinase; domain 1 121 228 - -
Lele08g0477 456 FunFam Protein kinase superfamily protein 121 228 - -
Lele08g0477 456 Pfam Protein tyrosine and serine/threonine kinase 160 424 IPR001245 GO:0004672|GO:0006468
Lele08g0477 456 ProSiteProfiles Protein kinase domain profile. 156 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0477 456 Gene3D Transferase(Phosphotransferase) domain 1 229 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0477 Lele-ChrLele08 2909874 2914325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0477 20 428 Receptor kinase-like Gene Family AT1G30570 34.713 1.15e-61 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele08g0477 PK_Tyr_Ser-Thr 1.2e-41 CL0016