Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0460 ATGGGAGGGAGGCAAATAAGATGGCCATTTGATGGGGGAACAAACTTTGCATATAAACACGCGAGGGTTGGCCATTGGTGCGTACGCCGGAAGAGGAAGCAGCGCCAGAAAGCTTTTGGCAGCCAGAGATTGGGAGTGCGTCTCTGCGGCATTCCTTTCAAGTCTCTGACGCACCCTCCCTCCCTCATTCATTTCTCTTCCTCCATGGCTCTCTCAGACTCCTCACGCCGCAACTCTTTGATCCCTACCTTTCTCTACTCTTCTTCCTCCACAAAAACCTTGCCTATCCAGAACATGTTCAACTCTACCCCAGCCGCCGCAGCCTCTTCTCCTGCTTCCAATCTGGAAGTCGTATCGCCCAGGCCCAACTTCATGATTCCGGCTCCAAGTGAGCCTGGCAAGATCCAGATGTACTCGCCTGCCTTCTATGGTGCTTGTACGGTCGGTGGAATTCTCAGCTGTGGTCTCACTCACATGGCGGTTACCCCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAAAGCATATCATCTGGATTTGGAGTATTGCTTAAGGAGCAGGGAGTAAGGGGTTTCTTCAGAGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCTCAGGGTGCTTGCAAATTTGGATTTTATGAGTTCTTTAAGAAGTATTATTCTGATATTGCCGGTCCAGAGTATGCGGCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATCGCTGATGTTGCACTTTGCCCCTTTGAGGCCGTAAAGGTTCGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTTTGGCTGATGGTTTGCCAAAATACGTTAGATCTGAAGGAGCAATGGGGCTATACAAGGGAATTGTTCCTTTGTGGGGACGCCAGATCCCATATACAATGATGAAATTCGCTTCTTTTGAAACTATCGTTGAGTTGATCTACAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAATCTCTGCAGCTTGGTGTTAGTTTTGCTGGTGGATACGTTGCTGGGGTATTTTGTGCTATTGTATCTCATCCTGCTGATAACCTCGTCTCCTTCCTGAACAATGCCAAGGGAGCTACAGTTGGTGACGCGGTGAAGAAGCTTGGTGTGTGGGGTCTTTTCACCCGTGGACTCCCTCTTCGTATTGTTATGATTGGAACTCTCACTGGAGCTCAATGGGGAATATATGATGCTTTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGTGCTGCTCCTGCCACCGCTCCTGCCTCTCAACAAGCCAAGGCTTAG 1323 0.4936 MGGRQIRWPFDGGTNFAYKHARVGHWCVRRKRKQRQKAFGSQRLGVRLCGIPFKSLTHPPSLIHFSSSMALSDSSRRNSLIPTFLYSSSSTKTLPIQNMFNSTPAAAASSPASNLEVVSPRPNFMIPAPSEPGKIQMYSPAFYGACTVGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKYVRSEGAMGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPATAPASQQAKA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0460 440 ProSiteProfiles Solute carrier (Solcar) repeat profile. 141 225 IPR018108 -
Lele08g0460 440 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 322 IPR018108 -
Lele08g0460 440 ProSiteProfiles Solute carrier (Solcar) repeat profile. 339 418 IPR018108 -
Lele08g0460 440 Gene3D Mitochondrial carrier domain 145 419 IPR023395 -
Lele08g0460 440 FunFam Phosphate carrier protein, mitochondrial 141 419 - -
Lele08g0460 440 SUPERFAMILY Mitochondrial carrier 146 414 IPR023395 -
Lele08g0460 440 Pfam Mitochondrial carrier protein 242 326 IPR018108 -
Lele08g0460 440 Pfam Mitochondrial carrier protein 146 227 IPR018108 -
Lele08g0460 440 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 107 429 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0460 Lele-ChrLele08 2806681 2811224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0460 74 440 Chloroplast and Mitochondria Gene Families AT5G14040 79.412 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0460 08 2806681 2811224 Lele08g0460 08 2806681 2811224 ECH
Lele07g0661 07 3779463 3783941 Lele08g0460 08 2806681 2811224 ECH
Lele05g0631 05 3720148 3724746 Lele08g0460 08 2806681 2811224 hybridization
Lele06g0447 06 2734206 2738602 Lele08g0460 08 2806681 2811224 hybridization