Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0442 ATGGAGAAGCTCCCCAGCTTTGTCGTCAATGGTGGCATCAAGCTCCCCATTGGCTACCGTTTCTGTCCCACCGATGAAGAGCTTGTCATTCACTACCTCAAGAGGAAGGCCTTCTCTCACCCCTTGCCCGCCTCCGTCATTCCCGACTTCGACGTCTTCGCCGCCCACCCTCGCCGCCTCCTAGGTGTCGGTGATTCCAAAGAGAAGAGGTATTTTTTTAGCCATAGAAAGGACGATATTCACAAGAGGCGTGCTGGTTCTGGGTACTGGAAAACCGTAGGCAAGGACAAGCAAATCATTGCTTCCGAGAGCAACCGAGTGGTTGGGTTGAGGAAAACTCTGGTTTTCTGTGAAGCCAAACGATCCCTTGAGGCCCGTATCCGGTGGGTCATGCATGAATTGCGTCTTCTTCCTTCTGAAACACCTTCCTACACATCACACCGGATGGCCGATTCAGACTGGGCTGTGTATCGCGTGTTTCAGAAGAGGAAGCTTAAGAGGAAAGTTGAGATATTAGAGGAGGATATTAAGCCCAGTTTCATAGATTTCACAGTGGAATATGGGAGTGACACGGGACCTCCCCCACCTAGTTCTCCATCTTCAAGTGAAGGCAATGAAATCGCTTCTAACAAGCTAGATTAG 642 0.5031 MEKLPSFVVNGGIKLPIGYRFCPTDEELVIHYLKRKAFSHPLPASVIPDFDVFAAHPRRLLGVGDSKEKRYFFSHRKDDIHKRRAGSGYWKTVGKDKQIIASESNRVVGLRKTLVFCEAKRSLEARIRWVMHELRLLPSETPSYTSHRMADSDWAVYRVFQKRKLKRKVEILEEDIKPSFIDFTVEYGSDTGPPPPSSPSSSEGNEIASNKLD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0442 213 MobiDBLite consensus disorder prediction 185 213 - -
Lele08g0442 213 ProSiteProfiles NAC domain profile. 15 162 IPR003441 GO:0003677|GO:0006355
Lele08g0442 213 SUPERFAMILY NAC domain 11 162 IPR036093 GO:0003677|GO:0006355
Lele08g0442 213 PANTHER NAC TRANSCRIPTION FACTOR 56 15 169 - -
Lele08g0442 213 Pfam No apical meristem (NAM) protein 16 136 IPR003441 GO:0003677|GO:0006355
Lele08g0442 213 Gene3D NAC domain 24 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0442 Lele-ChrLele08 2716703 2717604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0442 7 168 NAC Transcription Factor Family AT5G13180 45.509 2.53e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g0442 NAM 1.3e-26 No_clan