Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0425 ATGGATCCCAAGGGCTCAAAGCAATCGCAGGAGGTACCCAGCTTCTTGAGTCTCCCACAGCCACAAGCCAACAACATCATGGGAGAGAACAAGCCAGCAGAAATCAAGGATTTCCAGATTGCGATAGCCGATAAAGAAGACAATAACAACAAGAAGCAGTTAGCGCCCAAGAGGAACTCCAACAAAGACAGACACACCAAAGTCGAAGGCAGAGGAAGGAGGATAAGGATGCCCGCTCTCTGTGCCGCCAGAATCTTCCAGTTGACCAGAGAGTTGGGTCACAAATCCGACGGCGAAACCATTCAGTGGCTTCTCCAGCAGGCGGAGCCCTCGATCATAGCAGCCACCGGCAGCGGCACGATTCCGGCGTCAGTTTTAGCTGCTGCTGGCGGCTCTGTTTCGCAGCAGGGGACTTCTCTGTCCTCAGGTTTGCATCAGAAAATGGATGAATATGGGGGGTCCAATATTGGGTCGGGCAGTAGGACCGGGTGGGCTATGGTGGGCGGAAATCTGGGGAGACCCCATATGGCTACTGGTCTATGGCCCCCAGTAAGTGGCTTCGGGTTTCAGTCATCATCGGGTCCATCCACACCAAGTCTTGGAACCGAGAGTTCAAATTACCTGCAAAAGATTGGCTTCCCTGGCTTTGACTTGCCTGCAACAGCCACCAACATGGGGGCCATGAGTTTCACCTCAATTTTGGGAGGGACGAACCAGCAAATGCCCGGGTTGGAGCTTGGTTTGTCTCAAGATGGTCACATCGGTGTTATTAACCCACAAGCCTTGTCCCAGATTTATCAGCAGATGGGTCAGGCCAGAGTACACCAGCAACAACAGCAGAATCAGCATCAGCAGCAGCAGCAGCCTCCTCCTTCCAAGGAAGATTCTCAAGGCTCTGGACAGTGA 906 0.5309 MDPKGSKQSQEVPSFLSLPQPQANNIMGENKPAEIKDFQIAIADKEDNNNKKQLAPKRNSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASVLAAAGGSVSQQGTSLSSGLHQKMDEYGGSNIGSGSRTGWAMVGGNLGRPHMATGLWPPVSGFGFQSSSGPSTPSLGTESSNYLQKIGFPGFDLPATATNMGAMSFTSILGGTNQQMPGLELGLSQDGHIGVINPQALSQIYQQMGQARVHQQQQQNQHQQQQQPPPSKEDSQGSGQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0425 301 Pfam TCP family transcription factor 60 169 IPR017887 -
Lele08g0425 301 MobiDBLite consensus disorder prediction 268 301 - -
Lele08g0425 301 MobiDBLite consensus disorder prediction 1 71 - -
Lele08g0425 301 ProSiteProfiles TCP domain profile. 61 115 IPR017887 -
Lele08g0425 301 MobiDBLite consensus disorder prediction 7 27 - -
Lele08g0425 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 277 IPR005333 GO:0003700
Lele08g0425 301 MobiDBLite consensus disorder prediction 38 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0425 Lele-ChrLele08 2612696 2613601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0425 1 301 TCP Transcription Factor Family AT3G27010 54.740 1.86e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele08g0425 TCP 5.3e-30 No_clan