Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0420 ATGGACTGGGACTGGAAAGACTTGGCGTGGGATCCATCTGGGTCGGAGCTATCAAATGGAGCGGCTTCGGTGGACTTGAGTCTTGGAGAGACTTCCGATTTCACACAAAAATCACCCTCATACACACCTAAGGACTTACCGAGAGACTCGAAATCGGCATCATCGCCATGCGGTTCGTCAAAGAGGAGCCGTACGATGAATGGATCGGCGCAGAGTGTGTCGTGCTTGGTGGATGGATGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACACAGAGTGTGTGAGAAGCACTCAAAGACGCCCACTGTGTTGGTTGGGGGAAAGCAGCAGCGATTCTGCCAGCAATGCAGCAGATTCCATTCTCTGGGGGAGTTTGATGAAGTTAAGAGGAGTTGCAGGAAACGTCTTGATGGACATAACAGGCGCAGGAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGCTACAAAGGACCAAGAATCCTTCATTTTGGTAGTCCTCAGACGTACAACAACCCGTTTGTGAGAAGTATGTGGCCTGCCACTGCCAAAGCTGGAGCTGAACCAGTGATGATCAGTTATGACCAAAGCAGTCTGCTAAGTTCCTTTGCTAATGTGGAGTATCGGCAGGATAAGCAGCTTCCTCTCTTTGGATTAAACAGCTCTAAAGCATGCCATGGCAATGAGGCAGTGTCTGGAATTCCCAAGAGCCAAACAACTTCTGGTGCCGTTGCCCCATCACCAAGTGCAAATGGTGGCCGGAAGCTCGCTTCTGATTGCAAACCTGGATCTTTTGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCACCGTAACCTGTCCAGTGCACTCATCTCCGTTAGAAGATTTGCATTTTGATGTTGGGGACAAATACTCATCGGACAAATACTCATCATGCTCAGGAAGTCCACAAGAAAAGTCTACTGATCCATTATTGGTTGTGGATGCCGACACAGCCAACCTTCATTTCAGCCATATGATGCACATGAGGCCTGATGAAATTGTGGAAAATGGGGACTTGCCGACCTTTCCATTTTTCTGGGAGTAG 1134 0.4894 MDWDWKDLAWDPSGSELSNGAASVDLSLGETSDFTQKSPSYTPKDLPRDSKSASSPCGSSKRSRTMNGSAQSVSCLVDGCDSDLSDCREYHRRHRVCEKHSKTPTVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQTYNNPFVRSMWPATAKAGAEPVMISYDQSSLLSSFANVEYRQDKQLPLFGLNSSKACHGNEAVSGIPKSQTTSGAVAPSPSANGGRKLASDCKPGSFDSNCALYLLSTLQTQSQELSLVQSTVTCPVHSSPLEDLHFDVGDKYSSDKYSSCSGSPQEKSTDPLLVVDADTANLHFSHMMHMRPDEIVENGDLPTFPFFWE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0420 377 MobiDBLite consensus disorder prediction 239 265 - -
Lele08g0420 377 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Lele08g0420 377 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Lele08g0420 377 MobiDBLite consensus disorder prediction 241 256 - -
Lele08g0420 377 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
Lele08g0420 377 MobiDBLite consensus disorder prediction 28 68 - -
Lele08g0420 377 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
Lele08g0420 377 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 14 316 IPR044817 GO:0003677
Lele08g0420 377 Pfam SBP domain 75 148 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0420 Lele-ChrLele08 2568461 2570269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0420 68 173 SBP-box Gene Family AT5G50670 66.038 1.26e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele08g0420 SBP 1.4e-30 No_clan