Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0415 ATGGGTGGATTATTGGCAGAGAGATTTACATCCTTCTACAAGAACAGATGGTTTGTGTTTGTGGCTACAATGTGGTTGCAATCATGCGCCGGTGTTGGGTATTTGTTTGGTAGCATATCGCCGGTGATCAAGAGCTCTTTGAACTATAATCAGAAGCAGCTTTCCAGTTTGGGCGTGGCCAAAGACCTTGGCGATTGTGTCGGCTTCATCACTGGGGTCTTGTGCGAGATTTTGCCTTCCTGGGGGGCTTTACTTGTTGGTTGCTCGCTGAACTTTGTTGGATATGGCTGGGTTTGGCTTATCGTCACTGGTCGAGCTCCCACTTTGCCTTTGTGGGCTATGTGTGTTCTTATATTTGTGGGAACAAATGGTGAAACTTACTTCAACACAGTTGCTCTGGTGTCCTCCATTCAAAATTTCCCAAAAAGCAGAGGCCCTGTGGTTGGAATTCTGAAGGGCTTTGCAGGGCTGAGTGGTGCAATCTTGACTCAAATATATGCTATGATCCATTCCCCTGATCACGCGTCTCTGATCTTCATGGTTGCAGTTGGTCCCGCTTTGGTAGGGATAGGTCTGATGTTCATTATCAGACCTGTCAAAGGTCACAAGCAAATTAGGCCTTCGGATGACAAAAGCTTCATATTTGTTTACAGTGTGTGCCTCTTGTTGGCTGCTTATTTGATGGGAGTCATGCTTGTTCAAGATCTAGTAACCTTGAATCATAGCGTTGTTATGATTTTCACAGCAGTCTTGTTCATCATCCTCCTCGTCCCAATCTTCATTCCTATTTCAATGAGTTTTTTCTCAGAGCAAAAAGCTTCAGAAGAAGAAGCAGTACTGCTTCCTCAGCCCGAGACCCTAGAACGGGGTAATTCTGAAGTAATACTGAGTGAGGTGGAAGATGAGAAGCCTGAGGATGTGGACTCACTTCCTTCATCAGAAAGGAAGAAGCGTATAGCGCAATTACAATCAAAACTAGTCCAAGCAGCCGCGGTAGGGGCAGTGAGAGTCAAGGGGAGGAGAGGACCTCACAGAGGGGAGGACTTCACCTTGGGACAAGCTTTGATCAAAGCAGATTTTTGGCTTCTTTTCCTATCCCTTGTCTTGGGTTCAGGATCAGGGCTGACTGTGATAGACAACCTGGGTCAGATAAGCCAGTCTCTGCAGTATGACAACACACACATATTCGTGTCCATGATCAGTATCTGGAACTTTCTCGGCCGTGTAGGAGGCGGCTACATCTCTGAGATTGTAGTGAGGGATTATGCATTTCCAAGGCCAGTTGCATTGGCTGGGTTTCAACTTATAATGGCTTGTGGGCATGTGTTCATAGCAATGGGATGGCCTGGGGCAATGTACGTTAGCACACTACTGGTTGGGCTTGGTTATGGGGCCCACTGGTCAATTGTTCCTGCTGCTGCTTCTGAGTTATTTGGTCTCAGAAATTTCGGTGCTATGTACAATTTCCTTACCCTGGCAAATCCTTCAGGAACTCTTATTTTCTCTAGTCTAATTGCCAGCAGAATCTATGACTATGAAGCAGAGAAACAACATCCAGGATCATTATTGTCACGTGTGGTCAACGCCGCTGAACCTCCAAAATGTCAGGGTTCCATTTGCTTCTTCTTGACTTGTGGACTCATGGCTGGTCTCTGTATTGTGGCAGCTGTTTTAAGCATGGTTCTTGTGCGCCGAACTAAGACAGTTTACGCGCACCTATATGGGAAATCTACCACAAGAAATATTGGGTAA 1752 0.4606 MGGLLAERFTSFYKNRWFVFVATMWLQSCAGVGYLFGSISPVIKSSLNYNQKQLSSLGVAKDLGDCVGFITGVLCEILPSWGALLVGCSLNFVGYGWVWLIVTGRAPTLPLWAMCVLIFVGTNGETYFNTVALVSSIQNFPKSRGPVVGILKGFAGLSGAILTQIYAMIHSPDHASLIFMVAVGPALVGIGLMFIIRPVKGHKQIRPSDDKSFIFVYSVCLLLAAYLMGVMLVQDLVTLNHSVVMIFTAVLFIILLVPIFIPISMSFFSEQKASEEEAVLLPQPETLERGNSEVILSEVEDEKPEDVDSLPSSERKKRIAQLQSKLVQAAAVGAVRVKGRRGPHRGEDFTLGQALIKADFWLLFLSLVLGSGSGLTVIDNLGQISQSLQYDNTHIFVSMISIWNFLGRVGGGYISEIVVRDYAFPRPVALAGFQLIMACGHVFIAMGWPGAMYVSTLLVGLGYGAHWSIVPAAASELFGLRNFGAMYNFLTLANPSGTLIFSSLIASRIYDYEAEKQHPGSLLSRVVNAAEPPKCQGSICFFLTCGLMAGLCIVAAVLSMVLVRRTKTVYAHLYGKSTTRNIG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0415 583 CDD MFS_Mch1p_like 16 556 - -
Lele08g0415 583 SUPERFAMILY MFS general substrate transporter 9 205 IPR036259 -
Lele08g0415 583 SUPERFAMILY MFS general substrate transporter 214 567 IPR036259 -
Lele08g0415 583 Gene3D MFS general substrate transporter like domains 351 570 IPR036259 -
Lele08g0415 583 Gene3D MFS general substrate transporter like domains 11 204 IPR036259 -
Lele08g0415 583 Pfam Nodulin-like 16 263 IPR010658 -
Lele08g0415 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0415 Lele-ChrLele08 2537125 2540194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0415 1 579 Nodulin-like Gene Family AT5G14120 71.355 0.0 824
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0415 08 2537125 2540194 Lele08g0415 08 2537125 2540194 ECH
Lele05g0587 05 3449219 3452137 Lele08g0415 08 2537125 2540194 hybridization
Lele06g0408 06 2489529 2492526 Lele08g0415 08 2537125 2540194 hybridization