Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0405 ATGGCGGGAGAGGAGCCGCTCAAGCAAAGCACATCTCCATGCCCTTATCCTGCTACTACTTCTCCTTCTTCTCTTCTTCCAGGGAAAAACGATGATCCGAACCAAAAATGCTGGAGGAAGCAAGCGGACGAGAATCTTAAGAGGCTTCACTCTCTTCTCTTCGGGGCCGATCTTGCCCTTCAGAAGGATGATTTTGAGTCGGCCTACATCCTCGGGCTTCGCCTCATCGGCTTTCTTGACTCTCGCTGCCACTCCGATATCGATGAAGCCTATATACGTCCAATTCGCCGTGAAGTCTTGGGGAAAATCGACACCGCTCGTCGATCCCTCGTTCCAGACTCCGATCGCCAAGCGTTTGAACAAGCAAAAAAGTCTCCAGGGTGTATTTTTGGCAAAACAGGAGATATTGACATTGGGAGAATTAAGAAGTCGAAGTACTTCCAAGCTATATTCAAGGAATCCAAAGAAAAGGGTGATCATCTGGAGAAGCAAGACAAAGCAGGCAGCAAAATGCCAAAAGAATTGTTGCAAACAAAGTTATCATCAATGTATGGGAAAAGTACATTGAGGGCTTACAGTGGTTCCAAATTGAGTTTGAAACATAACAGATCTGAGGACTGCATGATTGTTGAAAAGCCTCTGTCACATGGTGGCCACAGTAAGGGTCATCCTGTCTCTTCTTTATTAAAAACTGAAGGGGAAGAAAGAACTTCTGGAACTTTGGGAACAAAGCTTGTGCACATGGAAACTAATAGCCCCAAAGTTAGTAACGTGAAGTCACCTTCAAGCAACGGGGAAGCCAAGTCTGATACTTGTGGCAGTGGGTTTGTTACTGCCAGAGCTAAATTGGAAATGGAAGCAAGGCAGAAGCGAGAAGGGATTGGTTCACCCACTGCATCTGCCTCACAATATGATAACAATTCTTTGAATCGGGTATATGGTGGGAGATCGTATGGTGTTTCACGACGTGGCGTCCGTGGTAATTTTGTACCTCCTATTAAATCCAATGGAACTGGCGATGGAAATATTACATCAAGAATTTCTGGAAAGTGTGATGATACTTTAGATGACTCAACAAAGAGATGTTTGGAAGGGCTATGTGGTCCTGACGGAGAGCTTCCCGAGAAATTGAGGAATATAGAACCTCGCCTTATTGAACATGTTAGCAATGAGATTATGGATAGAGATCCTAATGTCCGGTGGGATGACATTGCGGGATTGGAGCATGCCAAGAAATGCGTCACTGAGATGGTCATATGGCCTCTGCTACGTCCTGACATATTTAAGGGATGCCGCTCTCCTGGGCGAGGTCTACTTTTATTTGGTCCACCAGGAACTGGTAAAACAATGATAGGAAAGGCCATAGCAGGGGAGGCAAAGGCAACCTTCTTTTATATATCGGCGAGTTCATTGACAAGCAAGTGGATTGGAGAAGGTGAAAAACTGGTGAGAGCCCTCTTTGGAGTTGCCAGTTGTCGCCAGCCGGCTGTAATATTTGTCGATGAAATAGATTCTCTCCTATCTCAGCGTAAGTCAGAGGGAGAACATGAATCAAGTAGAAGGCTAAAGACACAATTTCTCATTGAAATGGAAGGTTTTGACATTGGTAACGAGCAGGTTCTTCTTATAGGGGCCACCAATCGTCCCCAAGAGCTTGATGAAGCAGCACGAAGGCGACTTACTAAAAGACTTTATATCCCCCTGCCATCCTCAGAGGCAAGAGCCTGGATTGTACGTAACCTCCTAGAGAAGGACGGACTATTAAAGCTTTCAAAGGAAGAGATTGATACCATATGCAACAAAACGGAAGGATATTCGGGATCAGACATGAAAAATTTAGTGAAGGATGCTTCAATGGGTCCCCTAAGAGAGGCTTTAAAGCATGGCATAGAAATTACTAAGTTGAACAAGGAAGATATGCGGCCAGTAGCTCTTCAGGACTTTATGGATGCCCTAAAAGAGGTGAGGCGATCTGTTTCCTCAAATGAACTTGGCGCATACGAAAAATGGAACGAACAATTTGGAAGCCTATCATCAGAAAAGCTCGAGTAA 2052 0.4488 MAGEEPLKQSTSPCPYPATTSPSSLLPGKNDDPNQKCWRKQADENLKRLHSLLFGADLALQKDDFESAYILGLRLIGFLDSRCHSDIDEAYIRPIRREVLGKIDTARRSLVPDSDRQAFEQAKKSPGCIFGKTGDIDIGRIKKSKYFQAIFKESKEKGDHLEKQDKAGSKMPKELLQTKLSSMYGKSTLRAYSGSKLSLKHNRSEDCMIVEKPLSHGGHSKGHPVSSLLKTEGEERTSGTLGTKLVHMETNSPKVSNVKSPSSNGEAKSDTCGSGFVTARAKLEMEARQKREGIGSPTASASQYDNNSLNRVYGGRSYGVSRRGVRGNFVPPIKSNGTGDGNITSRISGKCDDTLDDSTKRCLEGLCGPDGELPEKLRNIEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDIGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLLKLSKEEIDTICNKTEGYSGSDMKNLVKDASMGPLREALKHGIEITKLNKEDMRPVALQDFMDALKEVRRSVSSNELGAYEKWNEQFGSLSSEKLE 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0405 683 MobiDBLite consensus disorder prediction 251 271 - -
Lele08g0405 683 MobiDBLite consensus disorder prediction 213 239 - -
Lele08g0405 683 FunFam Fidgetin like 1 569 655 - -
Lele08g0405 683 Pfam AAA+ lid domain 595 631 IPR041569 -
Lele08g0405 683 FunFam Fidgetin-like 1 397 579 - -
Lele08g0405 683 Pfam ATPase family associated with various cellular activities (AAA) 438 568 IPR003959 GO:0005524|GO:0016887
Lele08g0405 683 MobiDBLite consensus disorder prediction 12 30 - -
Lele08g0405 683 Gene3D - 397 671 IPR027417 -
Lele08g0405 683 ProSitePatterns AAA-protein family signature. 540 559 IPR003960 GO:0005524|GO:0016887
Lele08g0405 683 Pfam Vps4 C terminal oligomerisation domain 641 675 IPR015415 -
Lele08g0405 683 PANTHER AAA DOMAIN-CONTAINING 187 676 - -
Lele08g0405 683 CDD AAA 431 568 - -
Lele08g0405 683 MobiDBLite consensus disorder prediction 1 34 - -
Lele08g0405 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 674 IPR027417 -
Lele08g0405 683 Gene3D - 569 655 - -
Lele08g0405 683 SMART AAA_5 434 570 IPR003593 -
Lele08g0405 683 MobiDBLite consensus disorder prediction 251 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0405 Lele-ChrLele08 2489938 2495901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0405 353 677 Calmodulin-binding Proteins AT3G56690 32.456 4.15e-41 159