Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0403 ATGCCGGAGGGGCCGACTCCGGTCGCCTACGTGATGGAAGCAGCTTCAGGGCCTCATTTCTCTGGCCTACGCCGTGACGGTCTCGGTTCGTCTCTCCCTTCTCCATATACGTCTCCTATCCATCCTTTCGCTGCTTGCGCTCTTGATTCCTCAACCGTAGCCCCTGATTCTCCTCACAAACAGCCTTTCGTAATTGATTGCATGCAAAAGCTCCTAGGTGGCCACAGCGTCCAAGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTACTGGTAGTTTTCGACAGGTCAATGCTTCTGATGTCATTATATTAGAGGGAATTCTTGTTTTCCTTGATCAACGTGTACGTGATCTGATGAGCCTGAAAATTTTTGTTGATTCAGTGCTGCAAGTTACCTTTGTTAGGTTCCAATGTTGTGGTGACCAAAGTTTCAATCCAAAATTCAGATTGCCAATATACGCTTTGATTGCTATAGCAGAGCATGGTTTCGGCTCAATGCTTTACTGGCCTGTGTGATCCAAGGGGTCAATACTCAGAACACAGGATTTTTATCTTCATTATCAGGTTGTTGAGCATGGCCTTGGTCATTTGCCATTCACTGAAAAGCAAGTAGTTACTCCAACAGTGGGTGCTTTCGAGAATTCTTGTTTCACTTTGATCCCGTTCTCTATAGATCGTTTTGTCATAGAAACTACAATTGAATCTGATGCATGATCTATCTATACTGGAGTGGACTTCTGCAAGAAACTCTGTGGTGTTTCAATTGTTCGAAGGGGTGAGAGCATGGAAAATGCACTACGTGCATGTTGCAAAGGTATTAAAATTGGCAAAATTCTGATTCACCGAGATGGAGACTTTGGAAAACAGGACATTTCAGAACGTCATATTTTGCTTCTTGACCCTGTCCTTGCTACAGGTAATTCCGCAAGCAAAGCAATTGAGTTACGCATTCAGAAAGGTGTCTCGGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCCGAGGGAATCTTATGTGTGCGTAAAAGGTTTCCGTCCTTGAAAATTGTAACATCTGAGATTGAAGTTGGCCTAAACGAAGAGTTCCGAGTAATCCCTGGAATGGGCGAGTTTGGTGATCGGTACTTTGGTACTGATGATTGA 1149 0.4413 MPEGPTPVAYVMEAASGPHFSGLRRDGLGSSLPSPYTSPIHPFAACALDSSTVAPDSPHKQPFVIDCMQKLLGGHSVQVPIYDFKKHQRSTGSFRQVNASDVIILEGILVFLDQRVRDLMSLKIFVDSVLQVTFVRFQCCGDQSFNPKFRLPIYALIAIAEHGFGSMLYWPVXSKGSILRTQDFYLHYQVVEHGLGHLPFTEKQVVTPTVGAFENSCFTLIPFSIDRFVIETTIESDAXSIYTGVDFCKKLCGVSIVRRGESMENALRACCKGIKIGKILIHRDGDFGKQDISERHILLLDPVLATGNSASKAIELRIQKGVSESHIIFLNLISAPEGILCVRKRFPSLKIVTSEIEVGLNEEFRVIPGMGEFGDRYFGTDD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0403 382 CDD PRTases_typeI 246 353 IPR000836 -
Lele08g0403 382 FunFam Probable uracil phosphoribosyltransferase 224 380 - -
Lele08g0403 382 Pfam Uracil phosphoribosyltransferase 231 380 - -
Lele08g0403 382 PANTHER URIDINE KINASE 64 285 - -
Lele08g0403 382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 136 IPR027417 -
Lele08g0403 382 Pfam Phosphoribulokinase / Uridine kinase family 66 136 IPR006083 GO:0005524|GO:0016301
Lele08g0403 382 SUPERFAMILY PRTase-like 229 381 IPR029057 -
Lele08g0403 382 Gene3D - 185 381 IPR029057 -
Lele08g0403 382 Gene3D - 54 141 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0403 Lele-ChrLele08 2475319 2479145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0403 1 65 PRT Gene Family AT3G27190 54.545 5.70e-08 52.8