Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0394 ATGGTCCAGCTAGGGGCACAAGCTACATCAATCTGTCGACCAATTTCAGTTGAAGAGTTGAAGGAAGCCACAAGAAACTTTGACATGTCAGCGTTTATTGGTGAAGGCTCCTTAGGAAAGCTATACAAAGGTAAACTAGAGAATGGATCCTACGTGGCAATACGATCTTTAGCTGTGTCAAAGAAATACTCAATTCAGAATCTTAAAGCTTGGTTGGATTTACTCTCAAAGCTCCAACATCCAAATTTGGTCGGCCTCTTGGGTTACTGTATTGATACTAATGAACAAGATGATTCAACCCCCGACAAACTTCATCTTGTATATGAGTATGTGCCCGATGGGAGTTACCGTGCCTACCTGTCAGAGTTTTCTCTTGAGAAGCCGCTCAAGTGGTCTGATAGATTAGCAATTTTAATTGGGGTTGCCAAGGTTGTGCACTTCTTACATACGGGGGGTTATTCCAGCCAAAGGGCATCATTTGAGGACGATGTTTATAACTTTGGATTCATATTGCTTGAATCACTTGGTGGAACCATAGCAAGCGGACAAGGGGAAACGTTTTTTCTGAATGAGAAGTATGCGGCTCAAGTGCAGGCCACAGCAGATGCAGACCAGAAATCAGAGTCTACGTCAGAATCTCAAGATTATAGGAGGGAAAAAACCTGGGATCCAACTGGACTAGCAGTTGAGAATTTTCTGCAATTGTACGTTAGTCGTGCTCGTAAACTCTGTTTTTTATGCTCAATGCAATCATTTTCTGAAAGGCGGGAGCCAACTCACTGTAGTTCTCGCTTGAATTTCACGGTTTCATCCCTTCTTCTCATTCTTGAGTCAGTTGAAGCGCGCACACAGTCACACACTAACGGAATCATAATATCGGCAGCGATGGTTCTAGGCTTGAGAGGAAAGAACAGGAGAAGTGCCACTGTTCAAATTGATTACCTCGTTCATATACAGGAGATCAAACCTTGGCCCCCTACTCAATCCCTCAGATCCCTTCGTTCTGTAGTAATTCAATGGGGAAATGGTGAACGCAGTTCAGGTTCTACCAATCTTGTTGTGCCCTCTCTTGGTTCTGTTATCGGTGAAGGAAAAATTGAATTTAATGAGTCATTTAATCTTCCTGTTACTCTGTTGAGGGATATGTCTGTCAGAGGCGGTAATGCTGATGTATTCCAAAAGAATTGTTTGGAGTTCAACTTGTATGAGCCTCGAAGAGATAAGGCCGTTAAAGGTCAGTTATTGGGAACTGCTGTCATAGATTTGGCAGATTATGGTAGGCTCAAAGAGACGTTGAGCATTAGTGCTCCATTGAACTGCAAGAGAAACTACAGAAACACAGATCAGCCACTTTTGTTCATTAAAGTTCAGCCTATTGACAAGGATCACAATAGCTCCTCTTTAAAGGACATGTCTTCAAAAGCTGTGTCAAAGGAAAATAGTGTTGGTGACTCTGTTTCAAAATTGATGAATGAAGAATACACTGAGGAGGCTGAGATTGCCTCTTTTACTGATGACGATATTTCCTCACATTCATCTGTGGCTGCAGTTACTTCTGCCCTTGAGTCAAACTCAAATGGAAATTTAACTCCTGAACTTCAAGAGAATGGATCTACTCAAAACACAGGTAGGAATGATAAGAAGAATCCACTGACTTCAGAAACAAGGATTAAAATATTGAATATAATACCGCAAGATACATATAAGAAGCTGGAGAGGAGTTCACCATACACATCGTCAGTGGACGTATCATCTGATCTTGAGAGTCCACTAAATGGTCAAACTTCTATTAGTTCTCATCATAGTTCAGTGACATCACAAAAGCACGTTGTCTCCTCAATCATTCATGGTTCTTCCCCATCTTTAGCACTTGACAATTTAGATGAAAATCCTAAGACCAAGACTGACAGCAGTTACTACAAGCATTTGAATCAGGATGTTCAAATAAATGCTGACACAAGTAGAACTATAACTACAGATGCTCAATCAAACCACAATGAATACACTTCTCATGGTTATCCTAGCAACACAGCATCTCCAGATAGTAATCACTATGTGGGAAAGAATCCTGGCACTGCAAACAAGGATGGTTCTGAAATCAACGACAAACGTTATAAGGGATGTAGGGAAGCTGAAAATTATCATTTGGAAGGCATAAGTGATAAATTTTACAGTAGTTCTGTTGAGGATGAACATGGAAAGGAAATTTCTAATTTGTATAAGCAATACCATGTGACAGATGAACAATCTGTAACTGAAGGTGTCGAAGATCAAATCCCATTGAGTACAGGTGCATATACCTTAGATGGGACAAATATTGGTTTGGAAGGCAATAGTATGAAAAGTGAAAGATTAAAGCATGTAAAGTCTGTAAGATCACCTACAGACTCAACATTGAGTACTGGATCACCTGGCAGTAATCATCATGCTGAAGTAAATGATGCTGCCATGGTTGGAGATGTGCAAAATAATGGAGGGAATATCAGAGTCAGTGACAAAAAAGATGCCAAGGTTTATCCAAAGGAAGCAAGGAGTTCAATTTCAGACAGAAAAATCAATCTTTTGGAAAGCAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCGGCTATAGAGGTTGCTCTATATTCTGTAGTTGCTGAGCACGGGAGCTCCATGAGTAAGATATATGCCCCAGCTCGGCGCCTTTCTAGGCTGTATCTTCATGCTTGTAAAGAAAATCTTAATGCAAGAAGGGCTGGGGCGGCTAAAAGTGCTGTTTCTGGACTAGTACTTGTTGCAAAGGCGTGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCTAATTCTGTTGTGTTAAGAACAATTATATGCCAAACCACCAAAAAAGTGGTGCCCTCTGTTACTGCTGGACCCAGTGTAAAAAGGAAAATTGGGAGAGAGGGGAATGACAAGATATCTCCCTCATTGCGATGGAAGGGGTCCTCTACGAGGAAAAATGAAAATACCACTGTTGAGCAAGGAGGTTTCGGTAACTGGGATGACCCCCTTGTATTCACATCAGCACTGGAAAAGGTAGAAGCTTGGATCTTCTCTCGCATTCTGGAATCTATATGGTGGCTGACTATGACTCCCCACATGCATCATGTTGATGCAAAGGTCACCAAAAAGGGTGTGGGCTCTTCCTCATGGAAAACCTTCCAAAATTTGTCTACCTCATGTGATAATGAACAGGGGAAGTTTTCACAAGATATTTGGAAGAATGCTTTTAGGGAAGCCTATGAAAAGCTCTGTCCTATTCGAGGTGGAGGGCACGAGTGTGGCTGTTTGCCAGTGCTGTCCAGATTGATAATGGAGCAATGTGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTTCGTGAATCTGCTGATGAAATCCCAACTGATCCTGTATCCGATCCAATTAGTGATCCCAAGGTTCTTCCAATACCCCTCGGAAAATCAAGCTTTGGAGCCGGTGTGCAGCTAAAAAGTGCGATTGGGAACTGGTCTAGATGGCTTACAGCCCTATTTGGTATTGATGACGATGACTCACTTCAAGACAACGATGACCTTGAATCAGCTAATAATGATGGGAGGCAAAATGCACCTTGCAAGTCCTTCCATCTTCTTAATGCACTAAGTGAACTCTTGATGCTTCCTAAGGATATGCTACTCGGTACATCTGCCAGGAGAGAGGTATGCCCGATGTTTAGCACACCAGTAATCAAGAGGGTTTTAAACGATTTTGCCCCAGATGAATTTTGCCCAGATCCAATTCCAACTGCTCTTTTTGAAGCTCTGGATTCAGAGGATGATCTCGAGAATGGTGAGGAGTGCGTCAAAAACTTCCCATGCATTGCGACTCCCATAGTGTATATACCTCCCCCCGCATCTTCCATAGCAAGCATAATTGGAGAGGTTGGAAGCGAATCTAAGCTGAGAAGAAGTAGATCTTCGGTTCTCAGAAAGGCATACGCCAGTGATGATGAGCTCAATGAATTAAACTCTCCCCTATCTTTCACAGCTAACGATGGTCTCATGTCTAAAGCACATTCTACAAAATCCAATTGCAAGTCCAAAGATATTCAAAATTCATCTGCTGTCAGATATAAACTCCTCATGGATGTATGGAAGAACAGCGAATAG 4158 0.4185 MVQLGAQATSICRPISVEELKEATRNFDMSAFIGEGSLGKLYKGKLENGSYVAIRSLAVSKKYSIQNLKAWLDLLSKLQHPNLVGLLGYCIDTNEQDDSTPDKLHLVYEYVPDGSYRAYLSEFSLEKPLKWSDRLAILIGVAKVVHFLHTGGYSSQRASFEDDVYNFGFILLESLGGTIASGQGETFFLNEKYAAQVQATADADQKSESTSESQDYRREKTWDPTGLAVENFLQLYVSRARKLCFLCSMQSFSERREPTHCSSRLNFTVSSLLLILESVEARTQSHTNGIIISAAMVLGLRGKNRRSATVQIDYLVHIQEIKPWPPTQSLRSLRSVVIQWGNGERSSGSTNLVVPSLGSVIGEGKIEFNESFNLPVTLLRDMSVRGGNADVFQKNCLEFNLYEPRRDKAVKGQLLGTAVIDLADYGRLKETLSISAPLNCKRNYRNTDQPLLFIKVQPIDKDHNSSSLKDMSSKAVSKENSVGDSVSKLMNEEYTEEAEIASFTDDDISSHSSVAAVTSALESNSNGNLTPELQENGSTQNTGRNDKKNPLTSETRIKILNIIPQDTYKKLERSSPYTSSVDVSSDLESPLNGQTSISSHHSSVTSQKHVVSSIIHGSSPSLALDNLDENPKTKTDSSYYKHLNQDVQINADTSRTITTDAQSNHNEYTSHGYPSNTASPDSNHYVGKNPGTANKDGSEINDKRYKGCREAENYHLEGISDKFYSSSVEDEHGKEISNLYKQYHVTDEQSVTEGVEDQIPLSTGAYTLDGTNIGLEGNSMKSERLKHVKSVRSPTDSTLSTGSPGSNHHAEVNDAAMVGDVQNNGGNIRVSDKKDAKVYPKEARSSISDRKINLLESKIKMLEGELREAAAIEVALYSVVAEHGSSMSKIYAPARRLSRLYLHACKENLNARRAGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSVVLRTIICQTTKKVVPSVTAGPSVKRKIGREGNDKISPSLRWKGSSTRKNENTTVEQGGFGNWDDPLVFTSALEKVEAWIFSRILESIWWLTMTPHMHHVDAKVTKKGVGSSSWKTFQNLSTSCDNEQGKFSQDIWKNAFREAYEKLCPIRGGGHECGCLPVLSRLIMEQCVARLDVAMFNAILRESADEIPTDPVSDPISDPKVLPIPLGKSSFGAGVQLKSAIGNWSRWLTALFGIDDDDSLQDNDDLESANNDGRQNAPCKSFHLLNALSELLMLPKDMLLGTSARREVCPMFSTPVIKRVLNDFAPDEFCPDPIPTALFEALDSEDDLENGEECVKNFPCIATPIVYIPPPASSIASIIGEVGSESKLRRSRSSVLRKAYASDDELNELNSPLSFTANDGLMSKAHSTKSNCKSKDIQNSSAVRYKLLMDVWKNSE 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0394 1385 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 310 441 IPR019448 -
Lele08g0394 1385 MobiDBLite consensus disorder prediction 200 219 - -
Lele08g0394 1385 MobiDBLite consensus disorder prediction 792 808 - -
Lele08g0394 1385 MobiDBLite consensus disorder prediction 664 689 - -
Lele08g0394 1385 SUPERFAMILY Protein kinase-like (PK-like) 17 180 IPR011009 -
Lele08g0394 1385 ProSiteProfiles Protein kinase domain profile. 27 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0394 1385 MobiDBLite consensus disorder prediction 664 701 - -
Lele08g0394 1385 MobiDBLite consensus disorder prediction 790 809 - -
Lele08g0394 1385 Gene3D Transferase(Phosphotransferase) domain 1 6 175 - -
Lele08g0394 1385 ProSiteProfiles C2 NT-type domain profile. 302 460 IPR019448 -
Lele08g0394 1385 MobiDBLite consensus disorder prediction 521 553 - -
Lele08g0394 1385 Pfam Protein tyrosine and serine/threonine kinase 30 150 IPR001245 GO:0004672|GO:0006468
Lele08g0394 1385 Coils Coil 852 872 - -
Lele08g0394 1385 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 846 1382 IPR021827 GO:0005643
Lele08g0394 1385 MobiDBLite consensus disorder prediction 820 842 - -
Lele08g0394 1385 MobiDBLite consensus disorder prediction 571 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0394 Lele-ChrLele08 2423697 2434347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0394 3 191 Miscellaneous Gene Families AT5G14210 47.234 2.57e-56 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele08g0394 NT-C2 4.4e-09 CL0154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0394 08 2423697 2434347 Lele08g0394 08 2423697 2434347 ECH
Lele05g0567 05 3327971 3334711 Lele08g0394 08 2423697 2434347 hybridization
Lele06g0388 06 2379014 2390834 Lele08g0394 08 2423697 2434347 hybridization