Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0393 ATGGCTGATTCAAGATTGTGGACTGAGATGGCTGGAGGTGTTATTCAGCAGTTATTGAGGAGAAAACTTCAGTCCCAACACACTACCCCATCCCTTTTGTCATCCATCATCGCAAATAAAGATAATGCAGGCTCTACTGGCAGAAGTTCCTTGAGAGCACTTGCTTTAATTGGAGCTGGTGTCTCAGGATTTTTGCGTTTTGCAACAACTGCATCAGCTGATGAGGCTGAGCATGGCCTGGAATGTCCAAGCTGTCCATGGCCTCACAAGGGCATCCTCAAAGATGAGGTAAATGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTCACACGCCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCGTATGCAAATGAAGCAGCAGCTAGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGTCTTATTACCAAAGCCCGCCACAATGGTCAAAACTATGTATTTTCCCTTCTTACTGGTTATCGCGATCCCCCTGCTGGTATTTCGATTAGAGAGGGATTGCACTATAATCCTTATTTTCCTGGGGGAGCAATTGCCATGCCTAAAATGCTGAATGATGGTGCTGTTGAATATGAAGATGGCACCTCTGCTACAGAATCTCAGATTTTTGTACTATCCCTGGCACTGCTTCAAGCTGCCTATTCCCGTCGATTGAGATGGTCTGTTCTCAAGTCTCGCAAGCTGGTTGTTGATGTTGTCAACTAG 753 0.4622 MADSRLWTEMAGGVIQQLLRRKLQSQHTTPSLLSSIIANKDNAGSTGRSSLRALALIGAGVSGFLRFATTASADEAEHGLECPSCPWPHKGILKDEVNAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYRDPPAGISIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTSATESQIFVLSLALLQAAYSRRLRWSVLKSRKLVVDVVN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0393 250 PANTHER CYTOCHROME C1 42 94 IPR002326 GO:0009055|GO:0020037
Lele08g0393 250 Pfam Cytochrome C1 family 92 218 IPR002326 GO:0009055|GO:0020037
Lele08g0393 250 PRINTS Cytochrome C1 signature 182 193 IPR002326 GO:0009055|GO:0020037
Lele08g0393 250 PRINTS Cytochrome C1 signature 144 168 IPR002326 GO:0009055|GO:0020037
Lele08g0393 250 PRINTS Cytochrome C1 signature 111 131 IPR002326 GO:0009055|GO:0020037
Lele08g0393 250 PRINTS Cytochrome C1 signature 193 212 IPR002326 GO:0009055|GO:0020037
Lele08g0393 250 SUPERFAMILY Cytochrome c 90 219 IPR036909 GO:0009055|GO:0020037
Lele08g0393 250 Gene3D - 76 218 IPR036909 GO:0009055|GO:0020037
Lele08g0393 250 Gene3D - 219 249 - -
Lele08g0393 250 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 218 249 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0393 Lele-ChrLele08 2418160 2421290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0393 10 250 Chloroplast and Mitochondria Gene Families AT3G27240 62.460 7.78e-113 325