Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0374 ATGGCTTCTTGGAACTCAATTCCTCTTCACTTTTTGTACCAAGTACTGGGTTGGTTAACATTCATTTCCTGGGCCATCAGTTCTTACCCACAAATCATCTTGAACTTCCGTAGGAAAAGTGTGGTGGGCTTAAACCTTGATTACGAGATATTCAACTTAACAAAGCACTCCTCCTATCTCATCTACAACGCTTCCCTCTACTTCAGCACCGTCATTCAGAAGCAATACTTCCAGAGATATGGTTTTGCACAGATGATTCCTGTAGCGGCTAATGATGTTGCTTTCTCCACTCATGCCGTTATAATGACCTCTATTGTGTTATTCCAAGTTGCAATCTATGAACGGGGAAGTCAGGAATTCTCCAAATATGCCATTACAATAGTCTGCGTGGTATGGTTCATTGCTGCAGTTTGTTTCTTCGTAGCATTATCTGACCACTCTTGGCTTTGGCTCATCTCCATCTTCAACTCAATTCAAGTATGTATGACCATAATCAAATACATGCCCCAGGCATTCATGAACTTCTTGAGGAAGAGCACGGATGGATTCAGCATTGGCGGCGTTCTGCTTGATTTTTCTGGAGGAGTTTTCAACTACTCACAGATGGCCGTTCAATCTATAGATCAAGGTTCATGGGTGAACTTCCTTGGAAACGCTGGGAAAGTACTTATATCCTTGGTGACTATATTCTATGATTCAGTGTTGATGTGTCAGCACTATGTAGTGTATCATGGGAAGAAAGCAGCTGGAACTTATCCCAAACCTAATGACAAAACCGGAGAGCCGCTTATCCGTGAAACTTCAACAGATGATGTTACAGATCAACAAACAAAGGGTCTGCAGAAATATTGTGATCCGTCTTTACCGCAAGAGCAGCGGATTCTACCCCTTCCCTCCTCTCTTTTCTCACTGTCTCTCCTGCTTGCTTCCCAAACTCTCAATTCTTATCATGATCAACACAGGTCCATGGAGAGTATAGAACCTGATATAAAAAAACATCCGCCAGAATATTATGTGCAAAATGAAGATCAAATATCTCCTGGAGCAGTAATTGACGTTGGACAACAGAGTCAAAGCCCCAAGGCTTCCTCAATTGCAGATAGCGACATGGTCATTGATACTGAGAATGAGTGTACAAGCCCGAATGTTGGTCCTGTTGACCCAAGTCAGATGGGAAATGATGATGATTGTCTGAATTCAAACATTTCTTGTGATCACAATTTTCAGATTGAGGATGTGAATGGAATTCTCTCTCAGGAATCAGACATCTCCTCTGTTGATGTATCAAGTAACATTGATGTCATAAAAACTGAGGGGAAGCTGTCCATGGAACCAAAAGTCGGCATGGAGTTTGATTCAGAAGACCATGCTTACAAGTGTTATAGCAGGTATGCTGTTTTGAAAGGTTTCAGCGTAAGAAAAGATTTTGTCAACAAAAGTAGGGTGAATGGTGCAGTGGTATCTAGAAGATACACTTGCTACAGGCAGGGTTATCGGCCTAATAAACATAATGCCAATGTGAGGAAATCCCAGCCAGAAACAAGGACTGGATGCCTGGCCCATATGACTATCAACCGTCTTCCCAATGGCAAGTTTCGTGTCACTCACTTTGAAACAGAGCACAATCATGAGTTTGCAACACCCTGTACTGTTCATATGTTACCATCGCAGAGAAGATTGAGTTTTGCTCAAGCAGTTGAATCTAACGTGTCTAACAATTCTGTGTTGGATGGGGTACCAAAACTTGGAATGGGATTTGATTCAGAAGATCATGCATATGAGTTTTATAATACATATGCTGGACGTGTAGGTTTCAGTGTTAGGAAAGATTATGTAAATAGAAGTAAAATTGATGGTGCTGTAGCATCTAGAAGGTTCACATGCTTTCGAGAAGGCTTTCGGCAGAAAGACAAACGTGACATGAATGGGAAGAGGCATCGAAAAGAAACTAGAATTGGATGTTTAGCACAACTGAGTTCACATGTTACGATCACAGAAGAGAATAGCCACGAATCAAGCCATTAA 2025 0.4158 MASWNSIPLHFLYQVLGWLTFISWAISSYPQIILNFRRKSVVGLNLDYEIFNLTKHSSYLIYNASLYFSTVIQKQYFQRYGFAQMIPVAANDVAFSTHAVIMTSIVLFQVAIYERGSQEFSKYAITIVCVVWFIAAVCFFVALSDHSWLWLISIFNSIQVCMTIIKYMPQAFMNFLRKSTDGFSIGGVLLDFSGGVFNYSQMAVQSIDQGSWVNFLGNAGKVLISLVTIFYDSVLMCQHYVVYHGKKAAGTYPKPNDKTGEPLIRETSTDDVTDQQTKGLQKYCDPSLPQEQRILPLPSSLFSLSLLLASQTLNSYHDQHRSMESIEPDIKKHPPEYYVQNEDQISPGAVIDVGQQSQSPKASSIADSDMVIDTENECTSPNVGPVDPSQMGNDDDCLNSNISCDHNFQIEDVNGILSQESDISSVDVSSNIDVIKTEGKLSMEPKVGMEFDSEDHAYKCYSRYAVLKGFSVRKDFVNKSRVNGAVVSRRYTCYRQGYRPNKHNANVRKSQPETRTGCLAHMTINRLPNGKFRVTHFETEHNHEFATPCTVHMLPSQRRLSFAQAVESNVSNNSVLDGVPKLGMGFDSEDHAYEFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDMNGKRHRKETRIGCLAQLSSHVTITEENSHESSH 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0374 674 Pfam PQ loop repeat 152 207 IPR006603 -
Lele08g0374 674 Pfam PQ loop repeat 13 69 IPR006603 -
Lele08g0374 674 FunFam Cystinosin homolog 12 126 - -
Lele08g0374 674 Pfam FAR1 DNA-binding domain 594 660 IPR004330 -
Lele08g0374 674 Pfam FAR1 DNA-binding domain 461 546 IPR004330 -
Lele08g0374 674 Gene3D - 12 124 - -
Lele08g0374 674 SMART ctns 26 57 IPR006603 -
Lele08g0374 674 SMART ctns 165 196 IPR006603 -
Lele08g0374 674 MobiDBLite consensus disorder prediction 375 394 - -
Lele08g0374 674 MobiDBLite consensus disorder prediction 251 278 - -
Lele08g0374 674 PANTHER CYSTINOSIN 4 251 IPR005282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0374 Lele-ChrLele08 2299995 2304225 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele08g0374 FAR1 7.5e-21 CL0274