Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0369 ATGTGTCACAGCAAAACCCCCCCTCCTCCTCCTTCTCGTTCCAATCTCAGTCACAGTAACTCCGATTTTATTCTCACGACCAGAGATTCCCTGAGTCGTCTTGCAACACCTCGCCGTAAGAACAGAACAAAGACCAGGAAGCCCAAGTTCCTCAGCCTTCGTCTCCAGCTTTCATCAAACCAATCCGATCCAATGACCCATCATCAACAGCTCAACCTCTTCCCCTTACACCCTGAAAACTTGATCCATGACAAAGATGTCATGCACGACGACCACAACGTCGCTTTCCTCTTCACTTTCCATGGCCCCGCCACCCTCAACGGCCTTCTCGAACAGGACTCCACCACCACCACCACCACCACCACCACAAACACCACCGTGTCGGAGGAGGATTCTATGTCGCCACAGTGTTTGAGGCCGTGCCCCTTGGACGAGGCAAACGGGAGCTCGCTGGTACGGAAGGCGATGAAGAGGAGGAACGAGGAGGAGGAGAGGGACGGCAGGGAGGAGAGGTGGGTGTGTTACTCAGAGGTCACAAGCTACTGCAGCGCCACAACGACGGAGAGCAACGCCGCTACCACAGCGTCGGTGGGGTTACTGTCGTTGAAGCTGGATTATGAGGGTATATTAAATGCTTGGTCTGACAAAGGTCCTCTGTATGTTCCGGGAGAGACCCCACACGCTGTCCCCGACTTCCTTGATCATGTCCTTCCACACTATCCGCGGCATGTAGTATGGGAAGAGGGTGAGAAGAAGAAGAAAGGGAAGGAAGAAATGGGACAGAGGGAGGCGAGCGTGTTAAGATACAAAGAGAAGAGGCAAATCAGGCTCTTCTCCAAGCGAATCCGCTACGAGGTTCGTAAGCTCAATGCTGAAAAGCGCCCCAGGATGAAGGGACGATTTGTGAAGAGGGACTGA 918 0.5359 MCHSKTPPPPPSRSNLSHSNSDFILTTRDSLSRLATPRRKNRTKTRKPKFLSLRLQLSSNQSDPMTHHQQLNLFPLHPENLIHDKDVMHDDHNVAFLFTFHGPATLNGLLEQDSTTTTTTTTTNTTVSEEDSMSPQCLRPCPLDEANGSSLVRKAMKRRNEEEERDGREERWVCYSEVTSYCSATTTESNAATTASVGLLSLKLDYEGILNAWSDKGPLYVPGETPHAVPDFLDHVLPHYPRHVVWEEGEKKKKGKEEMGQREASVLRYKEKRQIRLFSKRIRYEVRKLNAEKRPRMKGRFVKRD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0369 305 Pfam CCT motif 262 304 IPR010402 GO:0005515
Lele08g0369 305 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 305 - -
Lele08g0369 305 MobiDBLite consensus disorder prediction 112 137 - -
Lele08g0369 305 ProSiteProfiles CCT domain profile. 262 304 IPR010402 GO:0005515
Lele08g0369 305 MobiDBLite consensus disorder prediction 1 23 - -
Lele08g0369 305 MobiDBLite consensus disorder prediction 112 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0369 Lele-ChrLele08 2278301 2279771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0369 200 304 C2C2-CO-like Transcription Factor Family AT1G73870 47.748 2.17e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele08g0369 CCT 1.1e-17 CL0281