Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0368 ATGGCCTCTTATCTTTCGCTCTTTCTTCTTCTCTCTGCTCTCTCCCTTTTCTCACTTGTTTCCTCCTCAGCAGTGCCACGCCCTGACCTAGTTGCCCAGGACGTTCACAGGAGAATCAATGCGTCTAGGAGAAACCTGGGTTATTTATCTTGCGGAACCGGGAACCCCATTGATGACTGCTGGCGTTGTGACTCCAACTGGGAGAAAAACCGGCAAAGGCTAGCCGATTGCGCCATTGGCTTCGGTAAGGATGCCGTTGGAGGGAGAAACGGCCGAATCTACGTCGTCTCGGACTCCGGGGACGACGACCCGGTGAACCCCAAGCCAGGAAGTGCCGATCCTACCATTAACAGCGAAGGGAATAGGTTTCTTGCTCCTGATAATAGGGCTAGCAAAGAAGTGACGAAGCACGAGGATGCTCCTGAGAGCGAGTGGGCCAACTGGAATTGGAGATCAGAAGGGGATCTTTTCTTGAACGGCGCATTCTTCAAGCAGTCTGGTGCTGCATCTTCTTCACCCTATGCTAGGGCGTCAAGTCTCAGTGCTAGGCCGTCTTCTCTGGTTGGTTCTATCACAGTCAGCGCTGGTGCACTTATCTGCAGAAAGGGCGCTGGTTGCTGA 621 0.533 MASYLSLFLLLSALSLFSLVSSSAVPRPDLVAQDVHRRINASRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCAIGFGKDAVGGRNGRIYVVSDSGDDDPVNPKPGSADPTINSEGNRFLAPDNRASKEVTKHEDAPESEWANWNWRSEGDLFLNGAFFKQSGAASSSPYARASSLSARPSSLVGSITVSAGALICRKGAGC 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0368 206 Gene3D - 112 199 IPR012334 -
Lele08g0368 206 Gene3D - 54 111 IPR012334 -
Lele08g0368 206 SUPERFAMILY Pectin lyase-like 110 199 IPR011050 -
Lele08g0368 206 PANTHER PECTATE LYASE 18-RELATED 36 111 IPR045032 GO:0030570
Lele08g0368 206 PRINTS Pollen allergen Amb family signature 77 94 IPR018082 -
Lele08g0368 206 PRINTS Pollen allergen Amb family signature 101 126 IPR018082 -
Lele08g0368 206 MobiDBLite consensus disorder prediction 97 142 - -
Lele08g0368 206 SUPERFAMILY Pectin lyase-like 33 111 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0368 Lele-ChrLele08 2274272 2275594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0368 89 206 Polysaccharide Lyase AT5G63180 62.500 1.08e-37 133