Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0349 ATGGATCGAACTTGTTCCATCATCAAGAAAAAGATGGGTCCATTTATAAAGCCTCTGCTGCTGCTACTGTTAACAATGGTCGCTGGTTCTGCGACAACGTTAAAATGTGGGAAGGCGTTTAAGATAATTCCTCCAAAAACGACGGTGATAATCCAGAATCTGTTAAGTCAAGGACAGGATCTGTCATTTCACTGCAGATCCAAGGAAGACGACCTGGGACAACAAACCGTAAAATATGGAGAGACATGGGGGTTCAGATTCAGACCAAGAGCTATATGGTACACAACGTTGTACCACTGCCAGTTCTGGTGGCCGTCACATGCATCGCCATACTACTTTAACGTATACGTAGAGGAACGAGACTATTGGTGCAAAGTGTGCTCTTGGGCCATTTATGATTATGCTCCTTGCATGTCTGGAACTTCTCTCTGCTTTCCTTGGGCTTCTGCAACATCACCTCCTGCCCCTCCTCTTCGTATTGCTAATGCCTCTACCCAATTATAA 504 0.4504 MDRTCSIIKKKMGPFIKPLLLLLLTMVAGSATTLKCGKAFKIIPPKTTVIIQNLLSQGQDLSFHCRSKEDDLGQQTVKYGETWGFRFRPRAIWYTTLYHCQFWWPSHASPYYFNVYVEERDYWCKVCSWAIYDYAPCMSGTSLCFPWASATSPPAPPLRIANASTQL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0349 167 Pfam Plant self-incompatibility protein S1 48 147 IPR010264 -
Lele08g0349 167 PANTHER - 43 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0349 Lele-ChrLele08 2186161 2186664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0349 45 151 Carbohydrate Esterase AT3G16970 35.043 1.44e-19 78.2