Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0339 ATGGAGAAACCGGTCGTCGTTGAAAACCTATGGAAGGGTGAGAGAGAAGCTCAGATTCAAGCAGCAATGGAGCTCACTAGATTAAGCACCAACCAGAGACACAAGTTGGCAGAAAATGGAATAATGGTTCCTCTGATTTCCATGCTTCATTCTCAAGACCATGAAGCCATTGAAGCTTCTCTCTGTGCTCTGCTCTGTCTGGCCTTTGGCAGTGAACGTTTTAAGCTTTTGTTTTATCAGTATATGGGAAATTCTGCAGGGAATTTCTCAGACCCAGAACTTGTATAAAACAAGATTCGGATCGTCAAGTCTGGAGCTTTACCAGTGTTATTGAATCTCCTCCAATGCGAAAGCCAACCACTCATAGAACTAACAATAGCTGCAATGCTAACCCTTTCTTCTTGCAAATCAAATAAGCTCGCAATAGCTTCATCTGGGGCTATCCAATTACTAATACAAATTCTCAATGGCGATTATGAAAATTGCATAAACACCCAATCCCTTCTTGACGCCATAGCCACTCTTCATAACCTCTCAACCAGTAAAGAGATAACACCATTGCTAGTTTCTTCTGGTATAACAATGTCCTTACTTGAACTAATTCACAACTCAGGAAAATCAAGTGAGACAGCAGAGAAAGCAATTGGGTTACTGGAAAACATTGTGTATTCATCAGAGATAGCATTAAGCGAAGCTGCAAGCATAGGAGGGGCCATAAGGATAGTGGTAGAGACAATTGAAGAAGGTTCCCTGATAGGGAAAGAGCATGCTGTGGGGATTCTGCTTCTGACATGCAAAAGTTGCAGAGAGAAATACAGAGGAATGATACTGAGAGAAGGAGTCATGCCTGGTTTGCTTCAATTAAGTGTGGATGGAACACAGAGAGCTAAAGGGATGGCTAGAGAATTATTACTGCTTCTGAGGGATTGTTCTAATAATTATGGTTCAGCAAGTGGGAGGAAGATGAATCATGTGATAATAGAACAGATAATGCAGGAGATTGATGAAGAAGGTGAGGAATTGGCTGGGAGTACTTTGAGATTGGTGGAGGAGATGATCGCAAAGCTTCATACATGA 1077 0.4169 MEKPVVVENLWKGEREAQIQAAMELTRLSTNQRHKLAENGIMVPLISMLHSQDHEAIEASLCALLCLAFGSERFKLLFYQYMGNSAGNFSDPELVXNKIRIVKSGALPVLLNLLQCESQPLIELTIAAMLTLSSCKSNKLAIASSGAIQLLIQILNGDYENCINTQSLLDAIATLHNLSTSKEITPLLVSSGITMSLLELIHNSGKSSETAEKAIGLLENIVYSSEIALSEAASIGGAIRIVVETIEEGSLIGKEHAVGILLLTCKSCREKYRGMILREGVMPGLLQLSVDGTQRAKGMARELLLLLRDCSNNYGSASGRKMNHVIIEQIMQEIDEEGEELAGSTLRLVEEMIAKLHT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0339 358 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 105 147 IPR000225 GO:0005515
Lele08g0339 358 SUPERFAMILY ARM repeat 4 308 IPR016024 -
Lele08g0339 358 SMART arm_5 135 180 IPR000225 GO:0005515
Lele08g0339 358 SMART arm_5 29 69 IPR000225 GO:0005515
Lele08g0339 358 SMART arm_5 94 134 IPR000225 GO:0005515
Lele08g0339 358 SMART arm_5 181 223 IPR000225 GO:0005515
Lele08g0339 358 Gene3D - 4 353 IPR011989 -
Lele08g0339 358 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 193 IPR000225 GO:0005515
Lele08g0339 358 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 192 226 IPR000225 GO:0005515
Lele08g0339 358 FunFam U-box domain-containing protein 4 229 347 - -
Lele08g0339 358 PANTHER U BOX DOMAIN-CONTAINING 7 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0339 Lele-ChrLele08 2125061 2126522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0339 6 309 U-box Gene Family AT3G54790 30.744 5.27e-22 95.9