Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0337 ATGGAGTCAGCTGTGAACGGAGTCGAGTCTATATCAGAGCTTCAGAATTCAGTTTCGGCACAAGATCATGACTCTCCTTCAACATCTGAAACTCCAACACCTTCTTCCTTACCTCCTTTAAGAGCATCATCAAGAAATTACGGAATTAAGATTCAACAAAAGCATCCTTATCAGGAAACCAACCAAGAACTCCCAAATACGTCCAAGCAACATCACAATTCTAGTGGGAAGTCAGGAGAAATTAGTTCAGGGAAGAATATATCTATGATGGAGACAAAGAATTATGAAGCAAAAGGCATATCAGCCCCATGTAAAGGAGTTGTAATTGATCAAACAAAGAGTTGCTCCCAGTCAGATTTAACGTTTTGTGCAAGTCCTCAGAATAGCTTCTATTCTGCTGCGGCTACCTATTCAGAAGCCAAACAAAGTTTCGCCAATACTGAAGTCAGTGAGCGTGTTAGTGTGGATAAGTCAGGTGAAAGTGGTGAAGCCACAAACTCTTGTGACTTAAACGAAAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGGAGTGATGTGAGTGATGAGAGCAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCTCACAAGGCTAATGATATAAGATGGGAAGCGATTCAAGCCGTGCGAACACGTGATGGGGTGCTGGAAATGAGGCATTTCAGGTTGTTGAAGCAATTGGGATGTGGCGACATAGGAAGTGTGCATCTTGCAGAATTGAGCGGCACAAGGACAGGTTTTGCAATGAAGATAATGAACAAAACAGAGCTGGCTAGTAGGAAGAAGCTTCTGAGAGCTCAGACAGAAAGAGAGATCTTGCAGTCTCTGGATCACCCTTTTTTACCCACGTTATATACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTCAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATGCTGCCAGGTTTTATGTAGCAGAAATTCTTCTTGCTTTGGAATACCTTCACATGCTTGGGATCATCTACAGAGACCTCAAACCAGAGAACGTGTTGGTGCGGGAAGACGGTCACATAATGCTCTCAGACTTCGACCTCTCTCTGCGTTGCGCCGTGAGTCCAACTCTCGTAAAATCCTCAAACTCAACCCTAGACGGAAGGACTTCGGGATACTGCATTCAACCAACCTGCATCGAACCGACCTGCGTGATTCAGCCAGATTGCATCCAACCCTCCTGTTTCACGCCTCGATTTCTATCAGGCAAAAAGAAAGACAAAAAGTCGAAACCAAAGAACGAAACACCGCACCAGGTGACTCCTCTCCCGGAGCTCATCGCCGAACCCACAAACGCCCGTTCCATGTCCTTCGTAGGCACGCACGAATACTTAGCACCCGAAATCATCAAAGGCGAAGGCCACGGGAGTGCAGTAGACTGGTGGACGTTCGGGATATTCTTGTACGAGCTTTTGTTCGGAAGAACGCCATTCAAGGGTTCGGCGAACAGAGCGACTCTGTTCAACGTGGTGGGGCAGCCATTGAGGTTTCCAGAATCACCCAGCGTTAGCTTCGCTGCTAGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCTCAACATCGTCTGGCTTATAGACGAGGAGCGACGGAGATCAAACAGCACCCATTCTTTCAGAACGTGAATTGGGCGCTGATACGGTGTGCGAACCCTCCGGAGGTTCCAAGGATGGTGGCCCTGAAAGAGATGTCGGCGGCTCAGAAAGTGCCAGGCGTTAAGCCTGCCGGTAACTATTTAGATATTGATTTCTTTTGA 1836 0.4717 MESAVNGVESISELQNSVSAQDHDSPSTSETPTPSSLPPLRASSRNYGIKIQQKHPYQETNQELPNTSKQHHNSSGKSGEISSGKNISMMETKNYEAKGISAPCKGVVIDQTKSCSQSDLTFCASPQNSFYSAAATYSEAKQSFANTEVSERVSVDKSGESGEATNSCDLNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRTRDGVLEMRHFRLLKQLGCGDIGSVHLAELSGTRTGFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEILLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLDGRTSGYCIQPTCIEPTCVIQPDCIQPSCFTPRFLSGKKKDKKSKPKNETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRMVALKEMSAAQKVPGVKPAGNYLDIDFF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0337 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Lele08g0337 611 Gene3D Phosphorylase Kinase; domain 1 228 312 - -
Lele08g0337 611 FunFam serine/threonine-protein kinase D6PK-like 313 380 - -
Lele08g0337 611 Gene3D Transferase(Phosphotransferase) domain 1 459 583 - -
Lele08g0337 611 Gene3D Transferase(Phosphotransferase) domain 1 313 409 - -
Lele08g0337 611 MobiDBLite consensus disorder prediction 1 86 - -
Lele08g0337 611 SMART serkin_6 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0337 611 ProSiteProfiles Protein kinase domain profile. 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0337 611 PANTHER FLIPPASE KINASE 1-RELATED 58 588 - -
Lele08g0337 611 Pfam Protein kinase domain 230 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0337 611 Pfam Protein kinase domain 462 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0337 611 SUPERFAMILY Protein kinase-like (PK-like) 206 584 IPR011009 -
Lele08g0337 611 FunFam Serine/threonine-protein kinase D6PK-like 227 312 - -
Lele08g0337 611 CDD STKc_phototropin_like 227 583 - -
Lele08g0337 611 FunFam serine/threonine-protein kinase D6PK-like 460 583 - -
Lele08g0337 611 MobiDBLite consensus disorder prediction 429 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0337 Lele-ChrLele08 2114782 2117527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0337 137 611 AGC Kinase Gene Family AT5G47750 71.690 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele08g0337 Pkinase 8.6e-37 CL0016