Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0306 ATGAAACACTCTTCTTCTTCTTCATGCCTTCTCTTCATTCCCATCTCCCTTCTCTTTCTCTCCCTTCCTCCCTCTCTTCTCTCCGATCCTCGAATCTCCCAGGCTGGCCTCTTCTGCGGCGCCTCCAAAGCTCCTCTCTCTTCCCATTACATTCCCATCTTCGTCCGAGAAATGCAGGCTCTCTCCCAAACCATCACCTCTCAGGATTGGGCTTCTCACTCTCTTAACCTCTCTTCCCCCCCCATCTTCGGCTTCGCTCAGTGCTTCCATGACCTTTCCCACACCGATTGCCTTCTCTGCTACGCCGCTAGCCGCACCAAGCTCCCTCGCTGTCTCCCCTCTCTTTCCGCCCGCATCTACCTCGACGGCTGCTTCCTTCGCTACGATAACTACAGTTTCTACTCCGAAGCCATTGATCCTGTTAGAGACACTCTGAACTGTAGCTCCAGTGATGGTGTGGTGAAGAATCAAGGTAGTGAGAGGCGGGAATTTGAGAAGAGTGTCGGCGAGGTGGTTGATAATGTGGTGAGGGTTTCAGTGGGAGAAGGATTAGGGTTTGGTGTGGTACAGGTTGGGGAAGTTTATGCTTTGGCTCAGTGTTGGAAGACATTGGGCAGTCACGAATGTGAGATTTGCCTGAGGAAAGCGGCAAGGGAAGTCAGAGGGTGCTTGCCTAACAGGGAAGGAAGGGCATTGAATGCTGGTTGCTATTTGAGGTACTCAACTCATAAGTTCTACAAACAAGGAGGTGAAGATGAAAAGGCTCAAAAGAGGTCATTTAGGAGGGGAGCCATCATAGCAACGGTGTTATCTGCGGCTGCAGTTTTGATGCTGTTTCTCTCTGCTTTTTATATAGTCTTCTCAAGATTATCAAATATGAATAAAGGAAGCAATCATCTCGGTCAGATTTCCATTTCCATAAACAAGTCGAGTTTGAATTTCAAATACGAAACTTTGGAGAAGGCCACAGATTATTTCAACTCTTCAAGAAAAATTGGGCAAGGAGGTGCCGGTTCTGTGTTCAAAGGGACTCTCCCAAACAGCAAAGTCGTGGCTGTCAAGAGATTGGTGTTTAATACCAGACAATGGGTTGACGAGTTCTTTAACGAAGTGAATTTGATTAGCGGAATTGAGCACAAGAACCTTGTCAAACTCTTAGGTTGTAGCATTGAAGGGCCCGAGAGCCTCCTTGTCTACGAGTACCTACCTAACAAGAGCTTGGATCAATTCAATTTTGGCTTAGATGATTTTCCAGCAGAAGAACTATCAAGGGTGCTTCAAATAGGGCTTCTATGCACACAAGCTTATGCTTCCCTGAGACCAACCATGGAAGAAGTTGTTGAGCTGTTAAGTAACTCAAATGTGGATGTTTCTGTACCAAATCAACCTCCTTTTTTGAGTACTAGCGCTGGGTTGCTAAACTCAGAGAGCTCCATTAGGTCTTACAGCACAAACAGTTTTGTTTCGAATGCATTGAAGAAGATTGAGATGTCCGAAGTATCATCCTCGGAGATCACCAGCACTCGCAGCTCAGCGGGGCCATCAAGAAGTGAAGAACCCATAAACCAAGCTTGA 1575 0.4686 MKHSSSSSCLLFIPISLLFLSLPPSLLSDPRISQAGLFCGASKAPLSSHYIPIFVREMQALSQTITSQDWASHSLNLSSPPIFGFAQCFHDLSHTDCLLCYAASRTKLPRCLPSLSARIYLDGCFLRYDNYSFYSEAIDPVRDTLNCSSSDGVVKNQGSERREFEKSVGEVVDNVVRVSVGEGLGFGVVQVGEVYALAQCWKTLGSHECEICLRKAAREVRGCLPNREGRALNAGCYLRYSTHKFYKQGGEDEKAQKRSFRRGAIIATVLSAAAVLMLFLSAFYIVFSRLSNMNKGSNHLGQISISINKSSLNFKYETLEKATDYFNSSRKIGQGGAGSVFKGTLPNSKVVAVKRLVFNTRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFNFGLDDFPAEELSRVLQIGLLCTQAYASLRPTMEEVVELLSNSNVDVSVPNQPPFLSTSAGLLNSESSIRSYSTNSFVSNALKKIEMSEVSSSEITSTRSSAGPSRSEEPINQA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0306 524 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 415 478 - -
Lele08g0306 524 FunFam Cysteine-rich receptor-like protein kinase 2 32 133 - -
Lele08g0306 524 Gene3D - 36 133 IPR038408 -
Lele08g0306 524 Gene3D - 148 245 IPR038408 -
Lele08g0306 524 ProSiteProfiles Gnk2-homologous domain profile. 146 245 IPR002902 -
Lele08g0306 524 FunFam Cysteine-rich receptor-like protein kinase 2 292 401 - -
Lele08g0306 524 FunFam Cysteine-rich receptor-like protein kinase 3 147 245 - -
Lele08g0306 524 Pfam Protein tyrosine and serine/threonine kinase 328 410 IPR001245 GO:0004672|GO:0006468
Lele08g0306 524 MobiDBLite consensus disorder prediction 498 524 - -
Lele08g0306 524 ProSiteProfiles Gnk2-homologous domain profile. 32 133 IPR002902 -
Lele08g0306 524 ProSiteProfiles Protein kinase domain profile. 326 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0306 524 SUPERFAMILY Protein kinase-like (PK-like) 302 415 IPR011009 -
Lele08g0306 524 Pfam Salt stress response/antifungal 61 131 IPR002902 -
Lele08g0306 524 Pfam Salt stress response/antifungal 156 242 IPR002902 -
Lele08g0306 524 Gene3D Phosphorylase Kinase; domain 1 288 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0306 Lele-ChrLele08 1852684 1855259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0306 11 439 Receptor kinase-like Gene Family AT5G40380 51.395 2.99e-144 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele08g0306 Stress-antifung 1.8e-11 No_clan