Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0288 ATGGAGCTTGTACCAGAAAAAAGATTTCCTCTCAATGCAAAAGATTATAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCACTGTGTATAGGGCACTCTGTGTGCCACTCAACAAAATAGTTGCCATCAAGGTTCTTGATCTCGAAAAGTGCAATAATGATTTGGATGGCATCAGGCGAGAGGTACAAACGATGAGCTTGATTGATCATCCAAATCTTTTACGGGCATATTGTTCTTTCACTGCTGGACACAATCTTTGGGTTGTGATGCCCTACATGTCTGGGGGATCCTGCCTTCATATAATGAAATCAGACTATCCTGAGGGATTTGAAGAGGCTGTTATTGCTACTTTATTGCGGGAGGTTCTCAAAGCTCTTGTCTATCTTCATGCTCATGGACACATACATAGAGATGTAAAGGCAGGTAATATTTTGATTGATTCTGATGGTATGATCAAATTAGCTGACTTTGGGGTGTCAGCATGTATGTTTGATGCTGGAGATAGGCAACGATCAAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAACAATTACATGGATATGACTTCAAGGCAGATATTTGGTCACTTGGTATAACAGCGCTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAAGTTTTGCTTATGACGTTACAAAATGCTCCTCCAGGCCTTGATTATGAAAGAGACAGGAGATTTTCTAAGTCGTTCAAAGATATGGTAGGAACCTGCCTAGTGAAGGACCCAAAGAAACGTCCGACTTCGGAAAAACTTTTAAAACACCCTTTCTTCAAACATGCCCGCTCATATGAATACCTAACTCGAACTATTCTAGATGGCCTTGCACCTCTAGGAGATCGTTTTAGGATGTTGAAGGCAAAAGAGGCTGATTTATTGGTGCAGAATAAGGCTCTTTATGAGGATAAAGAACAGCTATCGCAGAAAGAATATATTCGAGGAATCAGTGCATGGAATTTCAACCTTGAGGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGACATGTCAAATGCAGAAGAGCCAGATAAGGATAAGAGGCTACAAAACAAATCTGATGATAATGGGGTTCCTGCAGAAGGGTCATTGGCAGTACCAACTAACGATTTAGATGCTAAACCCACGTTGGATAAGGAGGATGGGTTCAGTGATCTTCAGGATTTGGAGAGTTCGCTTGCTTCATTTCCAATTAAACCTCTTGAAGCACTAAAAGGTTGTTTTGACATTTGTGAGGATGATGCAAATAACACTAGTCTGAGGGATTTGGACCAGGGTTATGGAAGAAACGAGAATGGAAGTTCTGGGCTTAGTTCAGTGCCACAAAATGCTTTAACTGAGCATAAAAAGTATTTGAGTGGTTCCTTGGTCCCTGATAATTTTCTCTCCCCTAAAAAGGTTGTTACTGATGGGGACAGGGATTATCTGCAACCAAAATATAATTCTGATCGGAATCATAGTGGTCCATTGTTATATCGTCAGAAGAGAGACACCAACAACCACCTTGCATCCGTTGATGATGCATCAGAAGGAGCAGTCATCCAGCGTAAGGGACGGTTTAAGGTTACTTCAGCAGATCTCAGTCCTAAGGGTCCAAACTGCACTTTTGGCCTGGTTTCTGGAGGTTCTTTTGGTCTCCCAAATCAGAACTCTACAGTTGCTTCCATTCTTCCATCACTTCAGTCCATTTTGCAACAGAACAGCAGGCAAAGGGAAGAAATTATTAAATTAATAAAGTATGTGGAGCAATCTTGTGGTAAGAATACTGAATCAGCAGAGGCAGGGATAGTTGATCTTTTGCAGGTACCACCTGCAACAAACAGGGAAAGAGAGCTGCATTCGCAAGTGATTCAGTTACAACAAAGTATTGGGAGTCTTGAGGAGGAAGTTCTAAGACAAAAAATGAAAAATGCCCGGTTAGAGAAGCAGTTGAACTCTATGGCCAACAGTGGGGAAGAGTGA 2019 0.4141 MELVPEKRFPLNAKDYKLYEEVGEGVSATVYRALCVPLNKIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAYCSFTAGHNLWVVMPYMSGGSCLHIMKSDYPEGFEEAVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSDGMIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSLGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKDMVGTCLVKDPKKRPTSEKLLKHPFFKHARSYEYLTRTILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDMSNAEEPDKDKRLQNKSDDNGVPAEGSLAVPTNDLDAKPTLDKEDGFSDLQDLESSLASFPIKPLEALKGCFDICEDDANNTSLRDLDQGYGRNENGSSGLSSVPQNALTEHKKYLSGSLVPDNFLSPKKVVTDGDRDYLQPKYNSDRNHSGPLLYRQKRDTNNHLASVDDASEGAVIQRKGRFKVTSADLSPKGPNCTFGLVSGGSFGLPNQNSTVASILPSLQSILQQNSRQREEIIKLIKYVEQSCGKNTESAEAGIVDLLQVPPATNRERELHSQVIQLQQSIGSLEEEVLRQKMKNARLEKQLNSMANSGEE 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0288 672 MobiDBLite consensus disorder prediction 491 510 - -
Lele08g0288 672 Coils Coil 628 662 - -
Lele08g0288 672 MobiDBLite consensus disorder prediction 357 373 - -
Lele08g0288 672 SUPERFAMILY Protein kinase-like (PK-like) 13 303 IPR011009 -
Lele08g0288 672 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0288 672 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 653 - -
Lele08g0288 672 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Lele08g0288 672 Gene3D Transferase(Phosphotransferase) domain 1 97 304 - -
Lele08g0288 672 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0288 672 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lele08g0288 672 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0288 672 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Lele08g0288 672 CDD STKc_OSR1_SPAK 14 277 - -
Lele08g0288 672 MobiDBLite consensus disorder prediction 441 460 - -
Lele08g0288 672 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Lele08g0288 672 MobiDBLite consensus disorder prediction 354 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0288 Lele-ChrLele08 1710765 1718766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0288 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 66.522 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lele08g0288 Pkinase 1.4e-61 CL0016