Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0263 ATGTAACGAACGAGCAGGTTTTGTCCTTCCTGCTTCATTGAAGCCGATATCTGTAGAATTGCTGTTCTGGTATCACCCAATTTTAATGGAGGTGTATGGCTCCTTATTGGAATTATTATGGCAGTTCTATTCATAATAACTGTAACTGCATACATCTTGCTTCGTAAACTTTCCAAACCAACCCACCCCAGAAATGAAGCAGCAGCATTGGAGGAAGTTCTGGTGAAGGACAGTGCTTGCCCAAGAGTTCCTCTAAAGGAAGTCTACTCCGCCACCAACCATCTAAATGAAATCAATGTCATTGGTGAAGGAACTTTTGGGAAAGTTTATCAAGGTACAATGAGAAATAATCAACATGTTGCAATAAAGCACATCATCAATGATGATGGAAGCATGGAGACTTTTGTCAGAGAAATTACAAACTTGTCACATGTCAGACATCCAAATCTCGTCGCTTTGTTGGGTTGCTGTGTTGAGGGAGATGAATGTTTCCTTGTCTATGAACTGTGCCCCAGTGGGAGCCTTTCAGAGTGGCTATTTGGCAAGAACAAGGTTCTGTCCTGGATACAGAGGCTTAATATTGCAATTGGCACTGCAAAAGGTCTTTGGTTCCTTCATACATATCCTCAAGGCTGCATCGTTCACCGTGATGTCAAGCCAACAAACATTCTCTTGGGGCCGAAGTTCGAAGCAAAGCTATCAGATTTTGGACTCTCTAAAGTTTTAGATGTGGGTGAAACATATGTTAGCTCAGAAGTGAGAGGAACTTTTGGATATGTCGATCCTGAGTACCAAAGCAACCGCCATGTAAATTCATCTGGGGATGTCTACAGCTTTGGCGTGGTACTTCTGCAGATCCTCTCTGGGAAGAAGGCTATAAATTTGAAACTCAGGAAACCCATGACTCTGAATAAAATGGCAAAAGCACTCTCAAGGGATGGCAGCATAACAGAATTTGTTGATCCTAAACTTCAAGGGGAGTACTCAGAAGAAGCATTTGATTTTACCCTTCGTCTTGCTCTATCATGCACAGCCCTTAACCAACAACGTCCATCTATGGAGCAGGTTGTCACAAGACTGGAAGAGGCCCTATTAATTTCAATGAAGAATGTTTCTGCAACAGACACTTCAGTGGACAATCCTTCAATCAATTCTATGATACAGTGA 1167 0.4216 MXRTSRFCPSCFIEADICRIAVLVSPNFNGGVWLLIGIIMAVLFIITVTAYILLRKLSKPTHPRNEAAALEEVLVKDSACPRVPLKEVYSATNHLNEINVIGEGTFGKVYQGTMRNNQHVAIKHIINDDGSMETFVREITNLSHVRHPNLVALLGCCVEGDECFLVYELCPSGSLSEWLFGKNKVLSWIQRLNIAIGTAKGLWFLHTYPQGCIVHRDVKPTNILLGPKFEAKLSDFGLSKVLDVGETYVSSEVRGTFGYVDPEYQSNRHVNSSGDVYSFGVVLLQILSGKKAINLKLRKPMTLNKMAKALSRDGSITEFVDPKLQGEYSEEAFDFTLRLALSCTALNQQRPSMEQVVTRLEEALLISMKNVSATDTSVDNPSINSMIQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0263 388 Gene3D Phosphorylase Kinase; domain 1 57 169 - -
Lele08g0263 388 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Lele08g0263 388 FunFam probable receptor-like protein kinase At5g59700 170 379 - -
Lele08g0263 388 Pfam Protein kinase domain 97 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0263 388 SMART serkin_6 95 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0263 388 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 362 - -
Lele08g0263 388 ProSiteProfiles Protein kinase domain profile. 95 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0263 388 Gene3D Transferase(Phosphotransferase) domain 1 171 380 - -
Lele08g0263 388 CDD STKc_IRAK 101 362 - -
Lele08g0263 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lele08g0263 388 SUPERFAMILY Protein kinase-like (PK-like) 78 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0263 Lele-ChrLele08 1567154 1569473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0263 21 361 Receptor kinase-like Gene Family AT1G07650 39.045 7.35e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Lele08g0263 Pkinase 1.8e-44 CL0016