Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0227 ATGGTTGAAACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTCTCTCTTCACCCCCTTCTTCTAACGCCAAACGATCCAAGGTGTCAGAGGATGCGTCGTCAACCAGTCTTCCCTCGGCTGAAATTTTCGGTCAGGTCAACGAATCCGGAAATGAATCTCGAGAACCGGAGCTACGGCCGTCTGATCTGCCAGATGCCGATTCGTTGAAGGCTGTAGACCTGAGTGACGCGAGGTTACCTGAGAAATCCCCTGCCGTGGCAGTCGAAGGCGAGGCCCTGGTGTCACCGAGGTCTTCAGATGAAACAGCGGGGGAAGCGGAGAAATCAAAGTCTGCTGGTGTGGCGGCGCATGGGCGGTCGAAGAAACGCCCAACGAAATCCATAAAATTGAGCGCCAAGGCTGCATGGGGAAAGCTTCTCTCTGAGTGCTCTCAGAATCCTCATCGGTCCATGTGCGGGCTTTTCACTGTTGGTCAAGGACGTCAGTGTGATTTATGTCTTAAAGATTCTCCTGTTAGTAATGTTTTGTGCAAATTGAGGCACATCGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAGTGATAGGAGGTAAAGGTGTTGTCCAAGTCAATGGCAGGAACTACAATAAAAATTCCTGTGTGATCTTAAGTGGTGGTGATGAGGTGGTCTTCAGTTCTTGTGGCAAGCATGCTTATATTTTTCAACAGCTCACCAACAATAATATAACTACAACAGGGTTACCCCCTTCTGTAAATATATTAGAAGCTCGAAGTGCACAAATTAAGGGAATGCGAGTTGAAGGATCTGGGGACTCTTCAGCTGTTGCAGGAGCATCGATATTAGCATCTTTATCCAACCTTCATAAAGATTTATCTCTCCTTCCACCTCCTGCTAAAACCGGCGAGAATGCCACCCAGAATGCTGAGGTTTTGTCTGTGACTTCTGGCCTTAGGGATGATAGCATGGACAATGAAATGAAGGATGCCACCAAAAATGATGATTCAGCCGAAAATATTTTATCTGAGAAAACTGTTCTTGCATCCTCTGCTGCTGCCAATGAAAACCCTAGTCTTGACAGCAAGGGAGTAGATGCTGGTGTGGAAGCAGATGCCGGGAAGGTAAATGGGGCTGCCTATGAATTAAGGCCATTGTTGCACATGCTTGCTGGTTCTAGTGCTGAATTTGATTTGGGCATTAGCATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGATCTCCTTAAGGATTTTGACCCCACAACAATCTTGGCATCAACGAGGCGGCAAGCATTTAAGGAGAGTTTACAACAAGGAATTCTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGCGATACAACAAAGAACGTTCTGATTGCTTCTACATACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTCCCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCGGAGATATATCAGAAAACTTTGTCAAAGGCCCTTGCAAAGCATTTTGGTGCCAGGCTACTGATTGTGGATTCTCTTTCATTGCCTGGTGGGACGCCACCGAAGGAGTCTGATTCTGCTAAAGAAAGTTCTAGGCTTGAGAAAGCATCTTGGTTTAGTAAGCGAAGTGCACAGGCTACCACATTACCGCATAAGAAGCCAACTTCTAGTGTTGATGCTGAGATTGTAGGAGGATCAACATTAAGCTCTCAGGCCATGCTGAAGCAAGAGGTATCTACTGCATCATCCAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATGTTCCTTCAACCAGTATATCGCTAACAAATTATCCTTCTAGGGGACCAAGCTATGGCTCCCGTGGAAAAGTTCTTCTTGCTTTTGAAGAAAATGGGTCATCGAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGAGGATCGCGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCTGCAATGGATGACAATGACAAGCTTGCAATAAATGAGATTTTTGAGGTTGCCTCCAATCAAAGCAGAAGTGGTTCGCTAGTCTTGTTCCTGAAAGATATAGAGAAAGCAATGGTTGGAAACACTGAAGTTTTGAAGAGTAAATTGGAAAGTTTGCACCAGAATGTTGTTGTAATTGGCTCGCATACCCAGCCAGACAATCGCAAGGAAAAGACCCACCCAGGTGGCCTTCTGTTTACAAAGTTTGGGAGCAATCAGACTGCACTACTTGACCTTGCATTTCCGGATAATTTCAGTAGACTTCATGATAGGAGCAAAGAAACCCCCAAAACAATGAAGCAACTTAGTCGCCTTTTCCCCAACAAAGTGACAATACAGCTGCCTCAGGATGAGGCTTTGCTTTCTGATTGGAAACAGCAGTTAGAACGTGATGTTGAAACTATGAAAGCTCAGTCAAATGTTGTCAGCATTCGGACAGTTCTCAACAGGTTTGGATTGGATTGCCCTGACCTTGAGACTCTTCGTATTAAAGATCAAGCCCTAACAACTGAAAGTGTGGAAAAAGTCATTGGCTGGGCTATAAGTCATCATTTTATGCATCAATCTGAGGATTCAATCAAAGACTCTAAGCTTGTGATATCTACTGAGAGCATTAAGTTTGGGTTGAACATTCTAAAGGGCATTCTGAGTGAAAACAAGAACTTAAAGAAATCACTCAAGGACGTGGTTACTGAGAATGAATTTGAGAAAAAACTTCTTGCTGATGTTATTCCACCCAGTGATATTGGGGTCACTTTTGATGATATTGGAGCCTTAGAAAATGTAAAGGACACTTTGAAGGAATTGGTCATGCTTCCTCTTCGGAGGCCTGAATTGTTCTGCAAGGGACAGTTGACTAAGCCTTGCAAGGGAATATTGCTCTTTGGCCCCCCTGGTACCGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCGGTCTTTTCTCTAGCAAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGTGAGAATCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGCTTGCGTACGAAAGATAAAGAGCGTATACTTGTTCTTGCTGCGACAAATAGGCCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCTCGAAGATTGATGGTTAATTTGCCAGATGCTCTAAACAGAGAGAAAATTCTGAGAGTCATTTTAGCAAAAGAAGACTTGGCACCTGATGTTGAGTTGGAAGCAATCGCAAATATGACTGATGGATATTCAGGAAGTGACTTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATTAGAGAAATCTTGGAGAAGGAAAAGAAGGATAGAAGTTTGGCAGTGTCTGAGCACAAACCTTTACCTGCATTATGTAGCAGTGCCGACATTCGGCCTTTGAGGATGGAAGATTTCAAGTATGCACATGAGCAGGTTATTCTTCTCTTTTCTATCTCCCAAAATGCTGCAACTGAGAAACGCGCGGTATATAGCGCCAAACATAGAAAGCCCGATACCGCCATTCATTCATCAAATTAA 3750 0.4371 MVETRRSSSSAKRSLSSPPSSNAKRSKVSEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSLKAVDLSDARLPEKSPAVAVEGEALVSPRSSDETAGEAEKSKSAGVAAHGRSKKRPTKSIKLSAKAAWGKLLSECSQNPHRSMCGLFTVGQGRQCDLCLKDSPVSNVLCKLRHIERGGSSVALLEVIGGKGVVQVNGRNYNKNSCVILSGGDEVVFSSCGKHAYIFQQLTNNNITTTGLPPSVNILEARSAQIKGMRVEGSGDSSAVAGASILASLSNLHKDLSLLPPPAKTGENATQNAEVLSVTSGLRDDSMDNEMKDATKNDDSAENILSEKTVLASSAAANENPSLDSKGVDAGVEADAGKVNGAAYELRPLLHMLAGSSAEFDLGISISKILEERRDLRDLLKDFDPTTILASTRRQAFKESLQQGILNPDDIDVSFESFPYFLSDTTKNVLIASTYIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQKTLSKALAKHFGARLLIVDSLSLPGGTPPKESDSAKESSRLEKASWFSKRSAQATTLPHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSTSISLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEEDRGFFCSANHLLRVDGSAMDDNDKLAINEIFEVASNQSRSGSLVLFLKDIEKAMVGNTEVLKSKLESLHQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDVETMKAQSNVVSIRTVLNRFGLDCPDLETLRIKDQALTTESVEKVIGWAISHHFMHQSEDSIKDSKLVISTESIKFGLNILKGILSENKNLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLRRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKDRSLAVSEHKPLPALCSSADIRPLRMEDFKYAHEQVILLFSISQNAATEKRAVYSAKHRKPDTAIHSSN 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0227 1249 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 946 1122 - -
Lele08g0227 1249 Gene3D - 121 242 - -
Lele08g0227 1249 ProSitePatterns AAA-protein family signature. 1091 1110 IPR003960 GO:0005524|GO:0016887
Lele08g0227 1249 CDD AAA 986 1119 - -
Lele08g0227 1249 MobiDBLite consensus disorder prediction 320 337 - -
Lele08g0227 1249 Pfam ATPase family associated with various cellular activities (AAA) 988 1117 IPR003959 GO:0005524|GO:0016887
Lele08g0227 1249 Pfam AAA+ lid domain 1141 1177 IPR041569 -
Lele08g0227 1249 Gene3D - 1120 1214 - -
Lele08g0227 1249 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 430 1221 - -
Lele08g0227 1249 MobiDBLite consensus disorder prediction 1 51 - -
Lele08g0227 1249 SMART AAA_5 984 1121 IPR003593 -
Lele08g0227 1249 MobiDBLite consensus disorder prediction 52 77 - -
Lele08g0227 1249 MobiDBLite consensus disorder prediction 316 337 - -
Lele08g0227 1249 Gene3D - 946 1217 IPR027417 -
Lele08g0227 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 947 1222 IPR027417 -
Lele08g0227 1249 MobiDBLite consensus disorder prediction 1 127 - -
Lele08g0227 1249 SUPERFAMILY SMAD/FHA domain 153 227 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0227 Lele-ChrLele08 1364063 1375372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0227 947 1191 Calmodulin-binding Proteins AT3G56690 39.286 2.64e-41 163