Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0208 ATGGATGTGGATATCGACAGTCGCAATAATAAGTATGCCCATAACGGTAAGGTTCTGCTCGGCTCTGCTATTATTCTCTTCTTCATGTTTATCCTCATCATCTTCCTTCACAACTACCCTTACTCCTGCTTCCGCCACCTCCGCCCACAACGCCGTCGCCGCCACAATCGACCCCTCTTCCTGACCGCCACCGCCAATCCTCACACCACCCTTGACCCTTGTTTTTTCAAGTTTCTCCCCACCTTCACCTACTCCTCCGCCACTCACCTCCACTTCCAGGAATGTGCCGTGTGCTTGTCGGAGTTCGAGGAAGATGAGGCCGGTCGCGTCCTCCCTAACTGCAATCACTGTTTCCATACCTATTGCATTGATACATGGTTCCGCTCTCACTCCAACTGCCCAATATGCCGAGCTCTGGTTCAGCCGCCAAAAATCTCGCCACATAAAACCGAGGAGGGTGTTTACGATGGAGAGTTCGCGGGTTGCTCGTATCTTCCTCCGCCGATTTCGTGCCCGAGGAAGGGATTGGATTTAGATATGCTGAGCGTGATCGTGGAGGCGAGTAAGGAAGAACTGGGGGAGAATGCGGGGACTTCGGAGTCGGGTTCACCCGGAGACACCCGACTGAATAGTTCCGGTGATGGACTGTGGATGGGCAGGTGGAGGGAGCGGCCAGCGGAAAGGCGGTGA 690 0.5449 MDVDIDSRNNKYAHNGKVLLGSAIILFFMFILIIFLHNYPYSCFRHLRPQRRRRHNRPLFLTATANPHTTLDPCFFKFLPTFTYSSATHLHFQECAVCLSEFEEDEAGRVLPNCNHCFHTYCIDTWFRSHSNCPICRALVQPPKISPHKTEEGVYDGEFAGCSYLPPPISCPRKGLDLDMLSVIVEASKEELGENAGTSESGSPGDTRLNSSGDGLWMGRWRERPAERR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0208 229 SMART ring_2 95 136 IPR001841 -
Lele08g0208 229 MobiDBLite consensus disorder prediction 194 210 - -
Lele08g0208 229 MobiDBLite consensus disorder prediction 189 229 - -
Lele08g0208 229 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 140 IPR044675 -
Lele08g0208 229 Pfam Ring finger domain 94 137 IPR001841 -
Lele08g0208 229 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Lele08g0208 229 CDD RING-H2_EL5_like 94 137 - -
Lele08g0208 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 143 IPR013083 -
Lele08g0208 229 SUPERFAMILY RING/U-box 79 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0208 Lele-ChrLele08 1259154 1259843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0208 7 141 Rapid Response to Elicitors AT3G16720 48.980 1.15e-36 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0200 06 1231189 1231869 Lele08g0208 08 1259154 1259843 hybridization