Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0207 ATGAGAAGCGTCTCAAAGCTGTCATTGGCATTAATGGCCGTGTGCGTCCTGATTCTGACACCACACCAAATTAATGCGAAAGAAGGAGAACTGAGAGGGGAAGCGCTGATGAACAAGATATGCGAGAAAACGCCATCGAAGGATGTGTGCGTGGAAACCCTAAAAAAGGACAAGAGAACCGAAACGGCAGGGCTCAAAGAGATGGCGTTGATATCAGTGCAGGCGGCGAAGGACAACGCTTCAGATATAATAAATCACCTGAAGGTTCTGGTGGTGGATGATAGCTTGCCGCCGGATGTGCAACAGGGCATGTCGGACTGCTTGGATGTATTGGGAGATGCGCAAGATCAGCTCAACACAGCCACGGCGGCCATGTTGGTGTATGTCGGAGAGGACACCCAAAAATGGCTGAACGCGGCGGTGGACGCGGTGAGTACCTGTGAGAGTTACCTCCACGGAGATGATCATCTCCTCTTGCATAAGGAGGACAACTTCCGTCTCATGTGCCAGATTTCCTTGACCATAGTTGAGGCCATAGACAATAACGAACTTTAG 555 0.5045 MRSVSKLSLALMAVCVLILTPHQINAKEGELRGEALMNKICEKTPSKDVCVETLKKDKRTETAGLKEMALISVQAAKDNASDIINHLKVLVVDDSLPPDVQQGMSDCLDVLGDAQDQLNTATAAMLVYVGEDTQKWLNAAVDAVSTCESYLHGDDHLLLHKEDNFRLMCQISLTIVEAIDNNEL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0207 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 177 IPR035513 -
Lele08g0207 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 176 IPR006501 GO:0004857
Lele08g0207 184 Pfam Plant invertase/pectin methylesterase inhibitor 36 175 IPR006501 GO:0004857
Lele08g0207 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 173 - -
Lele08g0207 184 SMART PMEI_2 32 175 IPR006501 GO:0004857
Lele08g0207 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 179 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0207 Lele-ChrLele08 1256909 1257463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0207 37 147 Carbohydrate Esterase AT5G53370 26.087 1.12e-07 48.9