Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0206 ATGGCTTTCAAGCCATGCACCCTCTCAATAACAATGGCGTTTCTTCTTCTCCTTCCCTTGTTCATCTCCTTAGCATTTGCAGACCCTTCTCCTTCAACTCCGGTCACCCCAGGAACTGCATGCAGCTCCACCCCCGATCCTTCTTATTGTAAGTCCGTTCTTCCTTCCCACCAGAAAGGCAATGTCTACGACTATGGCCGTTTCTCCGTCAGCAAATCCTTATCGCAGTCTCGTAAATTCATGAGCCTAGTCGATAAGTATCTCAGACGACGATCCACTTTATCCACCGCCGCCGTTGGTGCACTCGAAGATTGCAGGACGCTGGCCGAGCTCAACTACGATTTCCTCTCAAATTCCTTTCAAACTGTGAACAAGACCACTAGGTTTCTTCCCAGTTTACAAGCAGATGATATCCAAACCCTTCTCAGTGCCATCTTAACTAACCAACAGACCTGCCTCGACGGCCTGAAAGACACGGCTTCGGCTTGGAGCGTCAAGAACGGACTCTCTGTTCCACTTTCTAACGACACCAAGCTTTACAGTATGTCTCTGGCTCTGTTCACAAAAGGCTGGGTTCCTGATGAGAAGAAGAAAACGACTGCGTTTCAGCCAACCAAGAAACAACTTGCCTTCGGACATGGGCGTTTGCCGCTTAAAATGTCGAGCAGGACTCTTGCCATCTACCAGTCGGTGAGTCGGAGAAAAATGCTTCAGGAAGCCACCGTGGGCGGTGACGTGGTTGTTGTGAAGGACATCGTAACGGTGAGACAAGACGGAACTGGAAACTTCACCACCATCAATGACGCCATTGCTGCTGCTCCAAACAAGTCTTCCTCCGCGAGCGGCTACTTCCTCATCTACGTCAGCGCAGGTGTTTACGAAGAAAACGTCAGCATCGATAAGAAGAAGACGTACTTGATGATGGTCGGAGACGGTACCAACAAGACCATCATTACCGGCAACCGGAGCGTCGTTGATGGGTGGACCACCTTCAACTCCGCAACTTTTGCCGTGGTAGGACAAGGATTCGTGGGGGTGAATATGACGATTCGTAACACGGCGGGGCCAGAGAAGCACCAGGCCGTTGCAGTTCGAAACGGAGCGGATCTATCGACGTTTTACAGCTGCAGCTTTGAGGGATACCAGGACACGTTATACGCCCATTCTCTGAGACAGTTCTACAGAGAATGCAACATATACGGCACCGTCGATTTCATATTCGGGAACGCCGCCGTGGTACTCCAAGACTGCAATCTGTATCCTCGTTTACCCATGAGCGGCCAATTCAACGCCATCACGGCACAGGGACGAACAGACCCGAATCAAAACACGGGCATTTCAATCCATAACTGCAGCATCAGAGCAACCGACGATTTGGCGGCGGCCAATGGTTCGGTGAGTACGTATCTCGGGAGGCCATGGAAGCAGTATTCGAGGACGGTTTATATGGAGAGCTTCATGGATAGTGTGATAGAGAGCGCGGGTTGGCAGAAATGGAACGGTGAGTTTGCGTTAAGCACTCTGTATTATGCAGAGTTCAATAACATTGGGCCTGGGTCGAGCACCGCCGACAGAGTGACGTGGCCTGGCTATCATATTATGAACGCCACCGACGCTGCTAATTTCACGGTGTCCAACTTCTTGCTTGGAGATGACTGGTTGCCTAACACCGGAGTCGCTTACACCAGCAACTTGATATAG 1701 0.5085 MAFKPCTLSITMAFLLLLPLFISLAFADPSPSTPVTPGTACSSTPDPSYCKSVLPSHQKGNVYDYGRFSVSKSLSQSRKFMSLVDKYLRRRSTLSTAAVGALEDCRTLAELNYDFLSNSFQTVNKTTRFLPSLQADDIQTLLSAILTNQQTCLDGLKDTASAWSVKNGLSVPLSNDTKLYSMSLALFTKGWVPDEKKKTTAFQPTKKQLAFGHGRLPLKMSSRTLAIYQSVSRRKMLQEATVGGDVVVVKDIVTVRQDGTGNFTTINDAIAAAPNKSSSASGYFLIYVSAGVYEENVSIDKKKTYLMMVGDGTNKTIITGNRSVVDGWTTFNSATFAVVGQGFVGVNMTIRNTAGPEKHQAVAVRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECNIYGTVDFIFGNAAVVLQDCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIHNCSIRATDDLAAANGSVSTYLGRPWKQYSRTVYMESFMDSVIESAGWQKWNGEFALSTLYYAEFNNIGPGSSTADRVTWPGYHIMNATDAANFTVSNFLLGDDWLPNTGVAYTSNLI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0206 566 FunFam Pectinesterase 246 565 - -
Lele08g0206 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Lele08g0206 566 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Lele08g0206 566 SUPERFAMILY Pectin lyase-like 249 563 IPR011050 -
Lele08g0206 566 SMART PMEI_2 32 186 IPR006501 GO:0004857
Lele08g0206 566 PANTHER PECTINESTERASE 22 555 - -
Lele08g0206 566 FunFam Pectinesterase 38 189 - -
Lele08g0206 566 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Lele08g0206 566 Pfam Pectinesterase 253 551 IPR000070 GO:0030599|GO:0042545
Lele08g0206 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 188 IPR006501 GO:0004857
Lele08g0206 566 Gene3D - 247 565 IPR012334 -
Lele08g0206 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 189 IPR035513 -
Lele08g0206 566 CDD PMEI-like_3 39 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0206 Lele-ChrLele08 1253263 1255075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0206 8 566 Carbohydrate Esterase AT4G02330 62.937 0.0 745