Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0205 ATGGCTTTCACGCTCTTGCCCTTTCTACTTCTCTCCTCGTTTTTCCTATTCCTTACCTCCTTCGTGTCCTTCTCTATAGCTCACGTTCCTCCAGAAACCTTCTGTAACTCCACACAGCACCCTTCTTATTGCAGACATGTTCTTGCTCGTTACCACGGCAACAACATATATGACTATGGACGTATCTGTTTTCGGAAATCCTTATCTCACTCCCACAAGTTCCTCAACTTGGTCAACTCCTATCTTCAATATCCCTCCTCTTTGTCCCAGTCCACAATTCGACCTCTTCAAGATTGTCAACTCCTCTCTCAACTTAACTATGAATACTTCTCAACCTCCTACTCCACTGTTAATCGTTCTAGCTATGTTCTTCCCTACTCTCAAGCCGAAGATATTCAAACCAAGCTCAGCGCCATTCTCACAAACCAACAGACTTGTTTGGAAGGCCTTCAGACAACGGCATCAGACGCAAGAGTAAAGAACAATCTTTCCGTCCCCCTCTTGAACGACACCAACCTTCACAGTGTCTCTCTTGCTCTGTTCGTCAAGGGCTGGGTCCCTGGAAAGAAATTCAGGCCATCATCTTCGCACAGCAGTGGAAGAAATTTAGGGTTCCGGCAGAACGGACGTTTGCCGTTGGAGATGTCAAGGCCAGCACGTGACATATATGAGTATGCCACAGGACGCGGGAGAAAATTGCTTCAAACTCTGACGGACGTAACAAGCATCGCGATAACGGACATCGTGGTAGTTAGTCAGGACGGAAGCGGAAATTACACCACCATCAACGACGCCATAGCAGCCGCCCCCAATAAAACCGCGTCTTCCCAAGGCTTTTTCTTGGTTTTTATCACGGAGGGTGTGTATAAAGAGTACGTAAACATAGACAAAAACAAATGGAACTTGATGCTTCTTGGAGATGGAATCAATCGCACTGTGATCACCGGCAATCGCAGTGTCGTCGATGGCTGGACAACATTCAATTCAGCAACATTTATTGTGGTGGGACAAGGATTCGTAGCGGCGAACATAACATTCAGAAACACGGCAGGGCCAAGCAAAAGGCAAGCAGTCGCATTAAGAAGTGGAGCGGACATGTCTGTTTTCTACAGCTGCAGTTTCGAGGGGTACCAAGACACTCTTTATACTCATTCGATGAGGCAATTTTACAGAGAATGTGACATATATGGAACGGTCGACTTCATATTCGGGAACGCGGCTGTTGTAATAGAAAACTGCAACATATATCCACGCTTGCCCATGAGTGGACAATTCAACGCTATCACAGCACAGGGTCGAACCGACCCGAACCAGAACACAGGCATTTCCATACAAAACGCCACTATAAAGGCTGCGGACGATCTCATGAATGCTCTGCAGAATGTGACGGTGAAGACTTACCTGGGGAGGCCATGGAAGCAGTACTCGAGGACGGTTTACATGCAGAGTTTCATGGACAGTTTGATAGATGCTTCGGGTTGGCGGGAATGGGATGGAGATTTTGCTTTGGATACGTTGTACTATGCAGAATATGACAACAGGGGACCCGGTTCGGACACTGCGAACCGAGTGAGGTGGCCTGGTCACCATTTGATTAATGATACGGATGCCGCTAATTTCACGGCGGCTAACTTCCTGCAAGCCAACGCTTGGGTGCCCCGCACCGGCGTGCCCTTCTTCTCCGGTTTGATTTAG 1695 0.4785 MAFTLLPFLLLSSFFLFLTSFVSFSIAHVPPETFCNSTQHPSYCRHVLARYHGNNIYDYGRICFRKSLSHSHKFLNLVNSYLQYPSSLSQSTIRPLQDCQLLSQLNYEYFSTSYSTVNRSSYVLPYSQAEDIQTKLSAILTNQQTCLEGLQTTASDARVKNNLSVPLLNDTNLHSVSLALFVKGWVPGKKFRPSSSHSSGRNLGFRQNGRLPLEMSRPARDIYEYATGRGRKLLQTLTDVTSIAITDIVVVSQDGSGNYTTINDAIAAAPNKTASSQGFFLVFITEGVYKEYVNIDKNKWNLMLLGDGINRTVITGNRSVVDGWTTFNSATFIVVGQGFVAANITFRNTAGPSKRQAVALRSGADMSVFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVIENCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIKAADDLMNALQNVTVKTYLGRPWKQYSRTVYMQSFMDSLIDASGWREWDGDFALDTLYYAEYDNRGPGSDTANRVRWPGHHLINDTDAANFTAANFLQANAWVPRTGVPFFSGLI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0205 564 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Lele08g0205 564 CDD PMEI-like_3 33 181 - -
Lele08g0205 564 SUPERFAMILY Pectin lyase-like 244 562 IPR011050 -
Lele08g0205 564 PANTHER PECTINESTERASE 24 553 - -
Lele08g0205 564 Pfam Plant invertase/pectin methylesterase inhibitor 32 179 IPR006501 GO:0004857
Lele08g0205 564 SMART PMEI_2 26 180 IPR006501 GO:0004857
Lele08g0205 564 FunFam Pectinesterase 32 183 - -
Lele08g0205 564 Gene3D - 242 563 IPR012334 -
Lele08g0205 564 FunFam Pectinesterase 242 563 - -
Lele08g0205 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 181 IPR035513 -
Lele08g0205 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 183 IPR035513 -
Lele08g0205 564 Pfam Pectinesterase 249 548 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0205 Lele-ChrLele08 1246952 1248733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0205 9 564 Carbohydrate Esterase AT4G02330 56.392 0.0 656