Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0204 ATGAGAAGTGGGGCAGACCAATCCACGTTCTACAGGTGCAGCTTTGAAGGGTACCAAGTCTCATTGGATCCACATTCAGTGAGGCAGTTTTACAGAGAATGCGACATCTACGGCACAATAGATTTCATACTTGGAAACGCAGCGGTTGTTCTGCAGAGCTGCAACATATATGCTCGTCTTGCATTACAGGGACAGTTCAATCCCATCACTGCTCAGGGAAGAACAGACACAAATCAGAACACAGGCATTTCCATCCATAACTGCACCATTAAAGCTGCCGATGACTTAGCTGCGAGTGGTAGCGACGTGAAGACTTATCTTGGAAGACCGTGGCAACGGTATTCGAGGACAATTGTGATGCAGTCGTTCTTGGATAGTGTGATTGATCCTGCAGGGTGGTCTATATGGAGTGGGGATTTCGCACTTGACACTTTGTATTACGCAGAGTTTGATAACAAGGGACCTGGAGGTGATGCTAGTAATAGAATGACGTGGCCGGGCTACCATGTGATTAATGCTACGGATGCAGCTAACTTCTCTGTTTCAAACTTTGTGCAGCGGGATGATTGA 570 0.4684 MRSGADQSTFYRCSFEGYQVSLDPHSVRQFYRECDIYGTIDFILGNAAVVLQSCNIYARLALQGQFNPITAQGRTDTNQNTGISIHNCTIKAADDLAASGSDVKTYLGRPWQRYSRTIVMQSFLDSVIDPAGWSIWSGDFALDTLYYAEFDNKGPGGDASNRMTWPGYHVINATDAANFSVSNFVQRDD 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0204 189 SUPERFAMILY Pectin lyase-like 3 187 IPR011050 -
Lele08g0204 189 Pfam Pectinesterase 1 187 IPR000070 GO:0030599|GO:0042545
Lele08g0204 189 PANTHER PECTINESTERASE 1 185 - -
Lele08g0204 189 Gene3D - 1 189 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0204 Lele-ChrLele08 1244582 1245151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0204 1 185 Carbohydrate Esterase AT2G47550 68.108 5.17e-96 287