Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0203 ATGGTATCTGAAGCAACAGGGTTGGTCATGAATTCATCTGCGATAGAGATGAATGCGAAGAGGGGAAGAAGAAGGAAAGTGGATTTGAAGAAGACATTCGAAGCCATTATCATGGTATGTAACCCACGGTTTGAAGGTAGCAATATTTCAGAATCGAGAATTTGTATTGCTCGCATTTACTCGTTCGTAGTAGTTTCAGATTTGCTTTTCCTGAGCAATCTTCCTGTCTTATCAGAAGGATACTTCCTGTGGGAGCCTGAAATGATTGAACTTGTCGTCCATCGAAACCTCAAGCCCCGGTTCTCTCTGTTCCTCACTTTCTTCCTCTTCCCAAATCTCACCATGTTTAATTTCACCAGAAGAACAGCTCTTTCCCTCGCTCTTGGGCTATTTCTCTCTTTAGTATCTCTGCTTCACTTTTTTCCACCCCATCGTCATGTCGGCCTCTCAAAAACACGCCTCCATTTACAAAATCACCTGCAAGCAGCCCACTCCACATGCCAAGGAACACTCTACCCACAACTCTGCGTTTCAACGCTTGCTTCCTTTTCCGATCTTACCTCCAAATCTGTCCCACAAACCATCTCCTCTGTCATCAATCTCACGGTGTCCGAGGTGAAATCCTCGTCCCATAACTGCAATGGCCTCCGAAGCAACCTCAGGAATCTCGACCCTCTCGAGCAGAGAGCCCTCGACGACTGTCTCAAACTGTTTGATGACACTGTCTATGAGCTCGACGCCACCATGGCCGATCTCTCCGGCGCCAGAATAGGCTTCAAGCGTTATCGTGACTTGCAGACACTGCTCAGCGGCGCAATGACTAACCTGTACACGTGTCTTGACGGGTTTGCTTATAGCAGAGGTAATGTGAGAGACAGGATACAGGACAGGTTGTTTGAGATCTCTCGTCATGTTAGTAACTCATTGGCCATGCTCAAGAACGCGCCAGGACTGAAGAAAGCTTCCGAGTCTGAGATCTTCCCGGAGTACGGAAACGTGAAGAATGGGTTCCCTTCGTGGTTGTACTCCAGAGAACGAAAGCTCCTGGAAGCTAACGTGAACGAGACGAGGTTCGATATTGTGGTGGCAAAAGACGGCACGGCCAATTTCACTACCATTGGGGAGGCTGTGAATGCAGCTCCGAACTCCAGCACGAGCAGGATTGTGATACACATAAAAGCCGGGGCATACTTTGAGAATGTGGAGGTGATCAGGAAAAAGACGAATTTGATGTTCGTTGGGGATGGAATTGGGAAGACGGTTGTGAAAGCCAGTAGGAATGTCGTCGACGGATGGACAACTTTTCAATCAGCCACCGTAGCTGTGGCGGGAACGGGATTCATAGCGAAGGGCGTGACGTTCGAGAACTCAGCCGGAGCGAGCAAGCACCAAGCCGTGGCTCTGCGAAACAGTGCCGACCTATCAGCATTCTACAAATGCAGCTTTGTCGGGTATCAAGACACACTCTACGTCCATTCCCTCAGACAATTCTACCGAGACTGCGACGTTTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGCTCTCTTCCAAAACTGCAACTTATACGCGCGCAAGCCTCTCCAGAACCAGAAGAACATGTTCACCGCTCAAGGCCGAGACGACCCCAACCAGAGCACCGGCATTTCCCTCTTGAACTGCAAAGTCGCCGCCGCAGATGATTTAATCCCCGTCAAGTCCTCATTCAAGACCTACTTGGGACGCCCCTGGAAGCCCTATTCCAGGACGGTGTATCTGAAATCTCACATGGAGGATCTGATCCAGCCTGCCGGCTGGTTGGAATGGAACGGAACGTTGGGCTTGGACACGTTGTATTATAGGGAGTACATGAATGGAGGTCCCGGTTCTAATGCGAGCGCCAGGGTTACATGGCCCGGTTTTAGGGTCATCAACTCCTCCGCCGAGGCTTCTCAGTTCACCGCCGCACGCTTTATTCAGGGATATGACTGGTTGAATTCCACCGCCATCCCCTTTTACCTTGACTTGAGCTGA 2016 0.503 MVSEATGLVMNSSAIEMNAKRGRRRKVDLKKTFEAIIMVCNPRFEGSNISESRICIARIYSFVVVSDLLFLSNLPVLSEGYFLWEPEMIELVVHRNLKPRFSLFLTFFLFPNLTMFNFTRRTALSLALGLFLSLVSLLHFFPPHRHVGLSKTRLHLQNHLQAAHSTCQGTLYPQLCVSTLASFSDLTSKSVPQTISSVINLTVSEVKSSSHNCNGLRSNLRNLDPLEQRALDDCLKLFDDTVYELDATMADLSGARIGFKRYRDLQTLLSGAMTNLYTCLDGFAYSRGNVRDRIQDRLFEISRHVSNSLAMLKNAPGLKKASESEIFPEYGNVKNGFPSWLYSRERKLLEANVNETRFDIVVAKDGTANFTTIGEAVNAAPNSSTSRIVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTVVKASRNVVDGWTTFQSATVAVAGTGFIAKGVTFENSAGASKHQAVALRNSADLSAFYKCSFVGYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAAALFQNCNLYARKPLQNQKNMFTAQGRDDPNQSTGISLLNCKVAAADDLIPVKSSFKTYLGRPWKPYSRTVYLKSHMEDLIQPAGWLEWNGTLGLDTLYYREYMNGGPGSNASARVTWPGFRVINSSAEASQFTAARFIQGYDWLNSTAIPFYLDLS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0203 671 Gene3D Invertase/pectin methylesterase inhibitor family protein 161 315 IPR035513 -
Lele08g0203 671 SUPERFAMILY Pectin lyase-like 358 668 IPR011050 -
Lele08g0203 671 FunFam Pectinesterase 353 670 - -
Lele08g0203 671 Pfam Plant invertase/pectin methylesterase inhibitor 164 311 IPR006501 GO:0004857
Lele08g0203 671 Gene3D - 353 670 IPR012334 -
Lele08g0203 671 SMART PMEI_2 158 311 IPR006501 GO:0004857
Lele08g0203 671 CDD PMEI-like_3 165 317 - -
Lele08g0203 671 Pfam Pectinesterase 359 655 IPR000070 GO:0030599|GO:0042545
Lele08g0203 671 PANTHER PECTINESTERASE 135 660 - -
Lele08g0203 671 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 164 314 IPR035513 -
Lele08g0203 671 TIGRFAM PME_inhib: pectinesterase inhibitor domain 128 314 IPR006501 GO:0004857
Lele08g0203 671 ProSitePatterns Pectinesterase signature 2. 503 512 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0203 Lele-ChrLele08 1238774 1244176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0203 187 670 Carbohydrate Esterase AT4G02320 53.307 0.0 536