Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0198 ATGTGTGGTGGTGCCATCATCGCCGACTTCATCCCTCGCCACCGTGGCCGCCGCCTTACCGCTTCTGACATCTGGCCCCAATCTTTGGGTAAGCCAAATGACGACGACTCCGACTTCGACCTCCATTTTCCTCAACCCGACCACTCTCTCTCCCGCAAATCATCACATCCTTCCCCAGTTGATCAGGAAGCCGAGAAGCCCTTGAAGAGGCAGAGGAAGAACCTCTATCGTGGGATCAGGCAGCGTCCCTGGGGTAAATGGGCTGCGGAGATTCGCGACCCCAGGAAGGGGGTTCGTGTTTGGCTCGGTACCTTCAACACTGCTGAAGAAGCCGCCAGGGCATATGACAGAGAAGCTCGGAAAATCCGCGGGAAGAAAGCCAAAGTCAATTTTCCCAACGAAGACGACTCCTACACTCTTCAGACTCGTCGTAGTAATCCACCGCCTCCGCTCCGAGCCCCAATTTCTCCCCTGTATCAACAGCAGTACGGCTCAAACTTGAACAATGTGCCTAAAAGTTTTGATTTGGAGTTTGGCTATGATCTGAACCAGGTGGACACAGTTCCTTCCCTTGGATTCGACACCGATCCAACTCTTGTTTCTGTATATGAGAATTCTGTATCTGGTTCCGAGGGCGCCTACTCCACGACGCAATTCCTGGACTCGAATCAGAAAGGAAACGGCTATTCCTCTCAGAGTCCAAATGTGGGCGTGGAAGGAAAAGCGAACGAGGCGGTGATGGAAGCCGAGGAAGATAAGAACGAGATACAGAAGCTGTCGGAGGAGCTGATGGCTTATGAGAACTATATGAAGTTTTATCAGATTCCATATTATGACGGGCAATCCACGGCGTCCAATAATGCACAGGAAAACGTGGTGGGTGATCTGTGGAGCTTCTACGACGAGGTCGTACCAGCTTCGGTGACGTCATCGGCCTGTGACGGCTAG 948 0.5243 MCGGAIIADFIPRHRGRRLTASDIWPQSLGKPNDDDSDFDLHFPQPDHSLSRKSSHPSPVDQEAEKPLKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDSYTLQTRRSNPPPPLRAPISPLYQQQYGSNLNNVPKSFDLEFGYDLNQVDTVPSLGFDTDPTLVSVYENSVSGSEGAYSTTQFLDSNQKGNGYSSQSPNVGVEGKANEAVMEAEEDKNEIQKLSEELMAYENYMKFYQIPYYDGQSTASNNAQENVVGDLWSFYDEVVPASVTSSACDG 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0198 315 FunFam Ethylene-responsive transcription factor 2 74 133 - -
Lele08g0198 315 MobiDBLite consensus disorder prediction 24 75 - -
Lele08g0198 315 Coils Coil 242 269 - -
Lele08g0198 315 CDD AP2 76 133 IPR001471 GO:0003700|GO:0006355
Lele08g0198 315 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Lele08g0198 315 Gene3D AP2/ERF domain 75 133 IPR036955 GO:0003700|GO:0006355
Lele08g0198 315 MobiDBLite consensus disorder prediction 58 72 - -
Lele08g0198 315 MobiDBLite consensus disorder prediction 33 49 - -
Lele08g0198 315 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Lele08g0198 315 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Lele08g0198 315 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Lele08g0198 315 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Lele08g0198 315 PANTHER DNA-BINDING DOMAIN 57 239 IPR044808 GO:0003700|GO:0009873
Lele08g0198 315 MobiDBLite consensus disorder prediction 130 156 - -
Lele08g0198 315 Pfam AP2 domain 76 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0198 Lele-ChrLele08 1210649 1211680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0198 1 133 AP2-EREBP Transcription Factor Family AT3G16770 55.000 2.53e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g0198 AP2 9.5e-13 CL0081