Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0193 ATGGCCGCAGAGAGGACATTGTCGTTTTCCGTGGCATCGGTAGTGGAAGATGTGCTTCAACAGCACGGGACTCAGCTAAAAGATCTTGATTTGGAATCCAGAAAAGCAGAAGAAACTGCATCAAGAAGATATGAAGCAGCAGGTTGGTTGAGAAAGATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCCGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATCCTCTGCAACGTTATTAATAAGGTTCAACCTGGAGCTGTACCCAAGGTCGTGGAAAGTCCTATTGATTCTGCACTTATCCCAGATGGTGCACCATTATCGGCATATCAGTATTTTGAAAACGTGAAAAACTTTCTTGACGCTGTCCAGGAAATCGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCGAGGATTGTAAATAGCGTTTTGGCGCTTAAATCCTATTGTGAATGGAAACAAAACGGGGCGAATGGTGCGTGGAAATTTGGTGGAGCTCTGAAACCCACAACTTTAGGAAAATCTTTTGTCAGAAAAAATTCAGATCCATTTACTAATTCCCTGTCCAGGACCTCATCCATTAATGAAAAATCTCTGCCTGCTTTAACCTCTGACGTTGAGTCTAATAAAATGTCGGTTTCTCATTCTTTGAGCATGCTGGTTCGTGCAATGCTATTGGACAAGAAGCCTGAAGAAGTTCCGATGTTGGTTGAATCCGTTTTAAATAAAGTGGTAGAGGAGTTTGAGCATCGCATTGCAGGTCAAGGTGAACAGACAAAAACAACTTCAAGAGACGCTGTTTCTCAAGGCAATGCTTCTGTATCAAAGCTTGTTTTGGGAGATAAGAAGGCGGAAAATAAAACTATTGTAGTTACAAAGAAAGAGGCAGTCATTCATAGAGACCGTGTCACTGATGAGGCATTGCAAACCCAACTTCTGAAACAGCAAACGCACTTTGATCAGCAGCAAAGAGAAATCCAAGAACTAAAGCATACTATTCATACTACAAAAGCTGGCATGCAGTTCATGCAAATGAAATTTCACGAGGAATTCTCCAATCTTGGTAGGGATTTGGAATCACAAAATTTAAGATCATCACTTTCTTGCATGCACATTAACGGCTTAGCTCATGCGGCTTCTGGATATCAGAGAGTTCTTGAAGAAAATCGCAAACTGTACAATCAAGTACAGGATCTTAAGGGAAGTATTAGGGTGTATTGTCGAGTAAGACCTTTCTTACCTGGACAATCAAGCTTTTCGAGCACAGTGGAGAATATAGAAGATGGAACTATCACAATTAATGTCTCATCAAAGAATGGGAAAGGACGCAGATCCTTTAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGCGGAGGTATTCTTTGATATGCAGCCTCTCGTCAGGTCTGTTCTTGATGGGTATAACGTTTGCATCTTTGCGTATGGTCAAACAGGATCGGGAAAAACTTACACTATGACTGGACCGAAAGAGATTACAGAGAAAAGCCAAGGTGTAAACTATCGGGCTCTGGGTGACTTGTTTCTTATGGCAGATCAGAGAAAAGACACTTTTCGTTATGATGTGTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGAGATCTACTAGTTACTGATGGAAGCAACAGAAGATATCCTTTTACTAGTCATATAATTGATTCGCACTCTTATATATCTCCCATGGATATAGCAGAGATCATATTGACTGCCTTGCCCTTAACCATCAATACATTAGAAATTCGAAATAGTTCTCATAAGGGGCTCAGTGTGCCAGATGCAAGCCTCATTCCTGTATCTTCAACTCTTGATGTTATTGATTTGATGAACCTGGGGCAAAGGAACCGTGCTGTTGGAGCAACTGCCCTTAATGATAGAAGTAGCCGCTCTCATAGGCATTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCAGGAACCATCCTTCGGGGATGCATGCATCTTGAGGACAGGCCAAGACCCTAATGTTCGTCCACGTAAGTCCAGAGAGTGACGCTCTTGGAGAAACAATCAGCACCTTAAAATTTGCCGAAAGAGTTGCTACAGTTGAGCTTGGAGCTGCTCGAGTGAACAAAGATAGTGCAGATGTTAAAGAGCTCAAGGAACAGATTGCTAGCCTTAAGGCAGCATTGGCAAGAAGGGAGGGAGAATCAGAACACGTGCAGCATTCTTTATCTGGAAGCTCTGAAAAATACAGGAAAAAGGCTGGTAGTGAGCTCTCACCTTATCATACCGACAAGCGGGGTGTAGATACAGTGGGTGATCCCCTCGGATGCCGGCAACCTATGGTTGATGTTGGCAACATAGAGCTTCACAGTAATAGCACATCGAAGCCAAAAACTCAGAGCTTTGATCTTGATGAGATATCAACAAATTCACCGCCGTGGCCCCCAGTGAGTAGTCCTGGACCAAACTACGGGGAAGATGATAAAGAAACTGGGTCGGGAGAGTGGGTTGATAAGGTCATGGTAAATAAGCAAGATGCGAGCAAAACTGAGAACCCCTTGGGACTCTGGGAAGCAGACAATAGACACTTATCTGATGTCTTTTATCAGAAATACCTCCAAGATTCTCCCAAAATGTATACTGATCAATCCTATAAAATGTTCATGGGAGGCAACCAGTTCAATGCTGCAGGTTCCGATGGCATGGATGATCTTGATGCTGCGACCAGTGATTCCTCGGAACACGACTTACTCTGGCAGTTTAATCATTCCAAACTTCCTGGCGTCGCCAATGGCATTGGACCAAAGTTAACAAAAGGCCCAGAACTGAGGAGGAAGAAATGGCATCCGGATAGGTGGACCATAGCCCCAAAGCTTGCTATAGAAGCTAAAACACGGTTTCAGCAAATTCAACAGGCTTATTCGGTTTTGTCTAATAAAGTGAAGAGAACCATATATGATGCTGGCTTGTTTCCTGTTAGATTATTTTCTTTCTCCGATCCATCTGTTTCCAGGGACCTATCATTATTGTATTCGCATGAATACACGTTGAAGGATCTTGAGAGACTGCTAATGGACATGATGGAAGACCACGGGGAAGGAACGGGGAAATCTGAGTTTCAATCCACCACTCCCACAAAAAAGATTCGTGTCAACTGTTCTACTTCTCCCACTTCCGGTGGCTTCCACATCCTTGGTTGCTCACTGCGTCCTTATTCAAAAGGGCAGAGGATGGCCTTCTACACTATTTCGCGGCGTTTATCGGGTGGATCATCGGTGGCGCAGCCTTCCGTGGCCTTGCGTCTTGTTCTCTCTTCTAGATCGTATTCTACTTCGTTCAGAGAAGAAAGAGATACCTTTGGACCAATTCAAGTCCCATCCGACAAACTATGGGGCGCGCAAACTCAAAGGTCGTTGCAGAATTTTGATATCGGTGGCGAGCGTGAACGAATGCCTGAACCCATTATTCGCGCCTTTGGCATCTTAAAAAAAGCCGCTGCTAAGGTGAACTTAGAATATGGCCTTGATCCCACCATTGGGAAAGCTATAATGCAGGCAGCACAAGAAGTAGCCGAGGGAAAGCTAAATGGCCATTTTCCGCTAGTTGTATGGCAAACTGGCAGCGGCACTCAAAGCAACATGAATGCTAATGAGGTTATTGCAAACAGAGCAGCTGAGATTCTTGGTCATAAACGTGGGGAAAAGTTTGTGCACCCGAATGACCATGTCAATAGATCACAATCTTCTAATGACACATTCCCAACTGTAATGCACATTGCAGCTGCAATGGAAATAAATTCAAGACTAATTCCAAAACTAAAAACCTTACATTCTTCACTACATGCCAAGTCTGTTGAATTCAAAGATATTGTGAAGATTGGGCGCACCCATACTCAAGATGCAACTCCATTAACTCTTGGGCAGGAGTTTAGTGGCTATACTACACAAGTGAAGTATGGAATTGATCGAGTGATGTGCACTTTGCCCCGAATGTATCAGTTGGCACAGGGCGGAACAGCTGTTGGGACTGGATTGAATACAAAGAAGGGGTTCGATGTTAAGATAGCAGCAGCAGTAGCTGAGGAAACAAACCTTCCCTTTGTCACAGCAGAAAATAAGTTTGAGGCCTTGGCTGCCCATGATGCTTTTGTTGAAAATAGTGGAGCCCTCAACACAATTGCAGCATCTTTAATGAAGATTGCGAATGATATACGTTTATTAGGAAGTGGTCCGCGTTGTGGCCTTGGTGAACTCATTCTTCCTGAAAATGAACCAGGAAGCAGTATTATGCCTGGGAAGGTTAACCCTACCCAGTGTGAGGCTCTAACAATGGTCTGTGCACAGGTCATGGGAAACCATGTAGCCATCACAGTTGGTGGAGCAAACGGTCATTTTGAACTCAATGTATATAAACCGATGATTGCAAGTTGTCTCCTGCAATCACTTAGACTGCTTGGAGATGCATCAGCTTCCTTTGAAAAGAATTGCGTAAGAGGTATCCAAGCTAATAGGGAAAGAATTTCAAAATTATTGCATGAGTCACTAATGCTTGTCACGTCCTTGAACCCAAAAATTGGTTATGACAAAGCTGCAGCAGTTGCCAAGACAGCGCACAAAGAGGGAACCACTCTTAAGGAATCTGCGTTGAAGCTTGGAGTACTTACCCCTGAAGAATTTGATACTCTCGTGGTGCCTGAGAAAATGATTGGCCCAACTGATTGA 4752 0.4356 MAAERTLSFSVASVVEDVLQQHGTQLKDLDLESRKAEETASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQPGAVPKVVESPIDSALIPDGAPLSAYQYFENVKNFLDAVQEIGLPTFEASDLEQGGKSSRIVNSVLALKSYCEWKQNGANGAWKFGGALKPTTLGKSFVRKNSDPFTNSLSRTSSINEKSLPALTSDVESNKMSVSHSLSMLVRAMLLDKKPEEVPMLVESVLNKVVEEFEHRIAGQGEQTKTTSRDAVSQGNASVSKLVLGDKKAENKTIVVTKKEAVIHRDRVTDEALQTQLLKQQTHFDQQQREIQELKHTIHTTKAGMQFMQMKFHEEFSNLGRDLESQNLRSSLSCMHINGLAHAASGYQRVLEENRKLYNQVQDLKGSIRVYCRVRPFLPGQSSFSSTVENIEDGTITINVSSKNGKGRRSFNFNKVFGPSATQAEVFFDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALGDLFLMADQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGSNRRYPFTSHIIDSHSYISPMDIAEIILTALPLTINTLEIRNSSHKGLSVPDASLIPVSSTLDVIDLMNLGQRNRAVGATALNDRSSRSHRHLLDCSCSRKRFDIRNHPSGMHASXGQAKTLMFVHVSPESDALGETISTLKFAERVATVELGAARVNKDSADVKELKEQIASLKAALARREGESEHVQHSLSGSSEKYRKKAGSELSPYHTDKRGVDTVGDPLGCRQPMVDVGNIELHSNSTSKPKTQSFDLDEISTNSPPWPPVSSPGPNYGEDDKETGSGEWVDKVMVNKQDASKTENPLGLWEADNRHLSDVFYQKYLQDSPKMYTDQSYKMFMGGNQFNAAGSDGMDDLDAATSDSSEHDLLWQFNHSKLPGVANGIGPKLTKGPELRRKKWHPDRWTIAPKLAIEAKTRFQQIQQAYSVLSNKVKRTIYDAGLFPVRLFSFSDPSVSRDLSLLYSHEYTLKDLERLLMDMMEDHGEGTGKSEFQSTTPTKKIRVNCSTSPTSGGFHILGCSLRPYSKGQRMAFYTISRRLSGGSSVAQPSVALRLVLSSRSYSTSFREERDTFGPIQVPSDKLWGAQTQRSLQNFDIGGERERMPEPIIRAFGILKKAAAKVNLEYGLDPTIGKAIMQAAQEVAEGKLNGHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAMEINSRLIPKLKTLHSSLHAKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVMCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETNLPFVTAENKFEALAAHDAFVENSGALNTIAASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGANGHFELNVYKPMIASCLLQSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDKAAAVAKTAHKEGTTLKESALKLGVLTPEEFDTLVVPEKMIGPTD 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0193 1583 MobiDBLite consensus disorder prediction 796 822 - -
Lele08g0193 1583 TIGRFAM fumC_II: fumarate hydratase, class II 1123 1580 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele08g0193 1583 ProSiteProfiles Kinesin motor domain profile. 678 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele08g0193 1583 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 341 566 - -
Lele08g0193 1583 SMART kinesin_4 411 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele08g0193 1583 FunFam Fumarate hydratase class II 1526 1583 - -
Lele08g0193 1583 Coils Coil 393 413 - -
Lele08g0193 1583 Hamap Fumarate hydratase class II [fumC]. 1123 1581 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele08g0193 1583 Gene3D - 27 176 IPR036872 -
Lele08g0193 1583 Gene3D - 1526 1583 - -
Lele08g0193 1583 Pfam Lyase 1131 1461 IPR022761 -
Lele08g0193 1583 CDD DnaJ 956 989 IPR001623 -
Lele08g0193 1583 SMART ch_5 42 160 IPR001715 GO:0005515
Lele08g0193 1583 ProSiteProfiles dnaJ domain profile. 910 1000 IPR001623 -
Lele08g0193 1583 FunFam Fumarate hydratase, mitochondrial 1258 1525 - -
Lele08g0193 1583 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Lele08g0193 1583 MobiDBLite consensus disorder prediction 743 781 - -
Lele08g0193 1583 Coils Coil 718 745 - -
Lele08g0193 1583 Gene3D - 1124 1258 IPR024083 -
Lele08g0193 1583 MobiDBLite consensus disorder prediction 743 844 - -
Lele08g0193 1583 Pfam DnaJ domain 956 997 IPR001623 -
Lele08g0193 1583 SUPERFAMILY Calponin-homology domain, CH-domain 36 171 IPR036872 -
Lele08g0193 1583 Gene3D DnaJ domain 953 999 IPR036869 -
Lele08g0193 1583 Coils Coil 19 39 - -
Lele08g0193 1583 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Lele08g0193 1583 Gene3D Kinesin motor domain 367 655 IPR036961 -
Lele08g0193 1583 SUPERFAMILY L-aspartase-like 1123 1579 IPR008948 GO:0003824
Lele08g0193 1583 Pfam Fumarase C C-terminus 1527 1579 IPR018951 GO:0006099|GO:0016829
Lele08g0193 1583 PRINTS Fumarate lyase superfamily signature 1436 1452 IPR000362 -
Lele08g0193 1583 PRINTS Fumarate lyase superfamily signature 1299 1317 IPR000362 -
Lele08g0193 1583 PRINTS Fumarate lyase superfamily signature 1253 1271 IPR000362 -
Lele08g0193 1583 PRINTS Fumarate lyase superfamily signature 1390 1417 IPR000362 -
Lele08g0193 1583 SUPERFAMILY Chaperone J-domain 956 1000 IPR036869 -
Lele08g0193 1583 PANTHER ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE 1114 1582 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele08g0193 1583 ProSitePatterns Fumarate lyases signature. 1436 1445 IPR020557 GO:0003824
Lele08g0193 1583 Pfam Kinesin motor domain 419 652 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele08g0193 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 746 IPR027417 -
Lele08g0193 1583 Gene3D Kinesin motor domain 673 753 IPR036961 -
Lele08g0193 1583 CDD Fumarase_classII 1124 1578 IPR005677 GO:0004333|GO:0006106|GO:0045239
Lele08g0193 1583 ProSitePatterns Nt-dnaJ domain signature. 977 996 IPR018253 -
Lele08g0193 1583 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Lele08g0193 1583 ProSiteProfiles Kinesin motor domain profile. 413 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele08g0193 1583 FunFam Fumarate hydratase, mitochondrial 1124 1257 - -
Lele08g0193 1583 Gene3D Fumarase/aspartase (Central domain) 1259 1525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0193 Lele-ChrLele08 1181225 1195185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0193 309 651 Calmodulin-binding Proteins AT5G65930 28.080 2.41e-33 139