Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele08g0187 | ATGGCCAAAGCCAATGCCAAGGAAAATTCCACTTCCGCTGCTCACCACCCTCCCTATTTCCATATGATATCGGACGCCATTTCTACGTTGAACGATCGCACGGGTTCCAGTCAGCAAGCAATTGCCAAGTTCATCGAGGACCAACACAAGCCCCTGCTGCCCCCAAATTTCAGGACTCTGCTTTCTTTTCAACTCAAGAAGTTTGTCAAGTCGGAGAGGCTGTTCAAGGTGAAGAATTCCTTCAAGATCTCCTCGGAGAACAAGAAGACCGCCAAACCACGTATGAAGGGTGAGACGCCTGCGCAGAAGGCTGCCAAGAAGATCACAGAGAAGGGGCTGAAGACCAAGAGGTTGAGTCACGTGAAGACACCGGAGGCTCTCCAGAAGGCCCGCAAGGATACTAAGAAGAAGTCGACAGCCTCGTCGGTTGGGAAAGACCGGAAAGTGAAGCACCTGAGTCAGGTTAAGTCTCCGGACGCAACGAAGAAGAAGACCAAAGTTACCCCTGTGAAGATCAAATCTACCAGGCCCGCGAGGAAGGCTAGGAAATAG | 552 | 0.5145 | MAKANAKENSTSAAHHPPYFHMISDAISTLNDRTGSSQQAIAKFIEDQHKPLLPPNFRTLLSFQLKKFVKSERLFKVKNSFKISSENKKTAKPRMKGETPAQKAAKKITEKGLKTKRLSHVKTPEALQKARKDTKKKSTASSVGKDRKVKHLSQVKSPDATKKKTKVTPVKIKSTRPARKARK | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele08g0187 | 183 | PANTHER | HISTONE H1 | 7 | 179 | - | - | |
Lele08g0187 | 183 | PRINTS | Histone H5 signature | 29 | 46 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
Lele08g0187 | 183 | PRINTS | Histone H5 signature | 162 | 181 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
Lele08g0187 | 183 | PRINTS | Histone H5 signature | 2 | 23 | IPR005819 | GO:0000786|GO:0003677|GO:0006334|GO:0030527 | |
Lele08g0187 | 183 | SUPERFAMILY | "Winged helix" DNA-binding domain | 13 | 95 | IPR036390 | - | |
Lele08g0187 | 183 | CDD | H15 | 13 | 96 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Lele08g0187 | 183 | Pfam | linker histone H1 and H5 family | 16 | 83 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Lele08g0187 | 183 | MobiDBLite | consensus disorder prediction | 167 | 183 | - | - | |
Lele08g0187 | 183 | MobiDBLite | consensus disorder prediction | 83 | 183 | - | - | |
Lele08g0187 | 183 | MobiDBLite | consensus disorder prediction | 83 | 166 | - | - | |
Lele08g0187 | 183 | Gene3D | - | 11 | 97 | IPR036388 | - | |
Lele08g0187 | 183 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 15 | 85 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Lele08g0187 | 183 | SMART | h15plus2 | 13 | 80 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele08g0187 | Lele-ChrLele08 | 1135734 | 1136374 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele08g0187 | 8 | 83 | Single Myb Histone (SMH) Gene Family | AT1G72740 | 39.474 | 5.02e-10 | 55.5 |