Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0174 ATGGCCGTCACTTCTCCCTCCCCCAACGCCTCGGACAAGAAGCACTGGTGGCTTTCCAATCGTAAGATTGTTGAGAAATACATTAAAGACGCTCGCGCCTTGATTGCCACCCAAGAACAGAGCGAAATCTCCTCGGCTCTGAACCTTCTAGACGCATCTCTGGCCATCTATCCACGCCTAGACAAAGCCCTGGAACTCAAAGCCAGGTCTCTTCTGTTTCTGCGGCGGTTCAAGGAGGTGGCCGATATGCTTCAGGACTACATCCCAAGCCTCAAAATGACAAGCGAAGACTCAGCCTCCTTTTCTTCTGATAATTCGTCACAGCAGTTCTCGAGGGAGGGGGTGAAGCTCCTTTCGTCATCCTCCGAGTTGCTGGGTCGGGACCAGAGTTTCAAGTGCTTCTCTGTATCAGAATTGAAGAAGAAAATCATGGCTGGACTATTCAAAAGTAGCGACGAAGAAGGGCAGTGGAGGTACTTGGTTCTGGGCAAAGCATGCTGCCATCTAGGTCTAATGGAGGATGCAATGGTTCTTCTCCAAACAGGTAAACGCATTGCCCGCGACGCCTTCCGCCGCGAAAGCATTTGCTGGACTGATGACAGCTTCTTCTTATCTGCAATCACTTTCTCCGGTGACGCTACCAACCCAATACCCTCCGCTCCTTCCAAAACACCTTTCACGGAGTTCGAAGGCATCGCCCAACTCCTCAGCCACATCAAGCTCCTCCTCCGACGTCGCACGGCTGCACTAGCCGCCCTCGATGCTGGCCTCTACTCTGAAGGCATCCGACATTTTTCCAAAATCGTTGAAGGCCGCCGCAGCGTGCCGCAAGGTTTCCTCGCCGAGTGTTATATGCTAAGAGCCTCCTCCTACCGCTCCGCCGGTCGCATTGCAGAGTCTATTGCTGACTGTAATCGGACTCTGGCTCTCGACTCGTCTTGCATTCAAGCTCTTGATACCAGAGCGTCCCTCCTGGAAACAATTCGATGCTTGCCGGATTGCTTGCACGATCTTGAACACTTGAAGCTTCTGTATAATTCGATCCTGAGGGATCGAAAGCTTCCCGGTCCTGCTTGGAAGCGCCATAATGCGAGTTACAGAGAAATTCCTGGGAAACTCTGCACTCTCACCACTAAAATCCAAGAACTTAAACGAAGAGTGGCTTCTGGAGAAACTAATAACGTGGATTACTATGCTCTGATCGGGTTGCCACGTGGGTGTTCTCGGTCGGAGTTGGAGAGAGCTCATCTATTGCTCTGCTTACGACACAAGCCTGATAAAGCCTTCAACTTTATTGATCGCTGCGAGCTGGCGGACGAACGTGATCTTGATTCGGTTAAGGAAAGAGCTAAAATGTCTGCATTGTTGCTTTACAGATTGCTTCAGAAAGGGTACACAAATATAATGGCAACGATCATGGATGAGGAAGCAGCTGAAAAACAGAGAAAGAAAGCAGCGGCTGCATTGCAAGCCGCACAAGCAGTCGAGTCTTCCAGATTGGAGTCCAATTTGAACGTCTCAGAGAAATTGTGTGGCAATAGGAATAATTGTTCAGTGGAAAATAAACCCACAATAGTATCTTCTTCGATTGCGAATTCGTCGGTTTTCCAAGGTGTATTTTGCCGTGATCTTGCTGCAGTCGGGAACTTGCTTTCGCAGCCGGGATTTAGCAATCCAATTCCTGTAAAGTATGAGGCGTTGAGCTGTTAG 1710 0.4971 MAVTSPSPNASDKKHWWLSNRKIVEKYIKDARALIATQEQSEISSALNLLDASLAIYPRLDKALELKARSLLFLRRFKEVADMLQDYIPSLKMTSEDSASFSSDNSSQQFSREGVKLLSSSSELLGRDQSFKCFSVSELKKKIMAGLFKSSDEEGQWRYLVLGKACCHLGLMEDAMVLLQTGKRIARDAFRRESICWTDDSFFLSAITFSGDATNPIPSAPSKTPFTEFEGIAQLLSHIKLLLRRRTAALAALDAGLYSEGIRHFSKIVEGRRSVPQGFLAECYMLRASSYRSAGRIAESIADCNRTLALDSSCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNASYREIPGKLCTLTTKIQELKRRVASGETNNVDYYALIGLPRGCSRSELERAHLLLCLRHKPDKAFNFIDRCELADERDLDSVKERAKMSALLLYRLLQKGYTNIMATIMDEEAAEKQRKKAAAALQAAQAVESSRLESNLNVSEKLCGNRNNCSVENKPTIVSSSIANSSVFQGVFCRDLAAVGNLLSQPGFSNPIPVKYEALSC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0174 569 CDD DnaJ 396 428 IPR001623 -
Lele08g0174 569 SUPERFAMILY Chaperone J-domain 392 430 IPR036869 -
Lele08g0174 569 Gene3D Tetratricopeptide repeat domain 238 354 IPR011990 GO:0005515
Lele08g0174 569 SUPERFAMILY TPR-like 247 339 IPR011990 GO:0005515
Lele08g0174 569 Coils Coil 475 495 - -
Lele08g0174 569 Gene3D DnaJ domain 381 507 IPR036869 -
Lele08g0174 569 SMART dnaj_3 395 477 IPR001623 -
Lele08g0174 569 PANTHER OS01G0273500 PROTEIN 4 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0174 Lele-ChrLele08 1085452 1087857 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0174 08 1085452 1087857 Lele13g2113 13 27971705 27972325 CCT
Lele08g0174 08 1085452 1087857 Lele14g2039 14 26318213 26325342 CCT
Lele08g0174 08 1085452 1087857 Lele16g0310 16 1727790 1730378 CCT
Lele13g2120 13 28016581 28016955 Lele08g0174 08 1085452 1087857 CCT
Lele15g0292 15 1650909 1651283 Lele08g0174 08 1085452 1087857 CCT
Lele16g0305 16 1694369 1694881 Lele08g0174 08 1085452 1087857 CCT
Lele08g0174 08 1085452 1087857 Lele08g0174 08 1085452 1087857 ECH
Lele05g0353 05 2026728 2029975 Lele08g0174 08 1085452 1087857 hybridization
Lele06g0170 06 1039531 1041936 Lele08g0174 08 1085452 1087857 hybridization