Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0171 ATGGCTTTTCCGACGTCGCCGTTGCTGGTTACAGTGTACTTGGTGGTGATACTGGTCGGTGTGGTGGTGCAGATGAGCGAGGCAGAGGAGCCTCTGGCCTGCGATCCCAGAGACGGCAACACCAAGAATCTGGCGTTTTGCAGGGCGTCGCTGCCGATAGGGGAGAGGGTGAGGGACCTGATAGAGAGGTTGACGCTGGAGGAGAAGGTGAAGTTGCTGGGTGACAATGCGGCGGCGATTCCACGGCTTGGGATCAGAGGGTACGAGTGGTGGTCGGAGGCGCTTCACGGGGTTTCCAATGTGGGTCCCGGAACAAGGTTCGCTCCTCCATTCCCTGCCGCCACCAGTTTCCCTCAAGTCATCACGACCGCTGCTTCTTTCAATGGTTCCTTGTGGGAGGCTATAGGACGGGCCGTGTCAGACGAGGCAAGGGCGATGTATAATGGGGGAATGGGTGGGCTCACATTCTGGAGTCCAAACGTGAATATTTTTAGGGACCCACGGTGGGGGCGTGGACAGGAGACTCCCGGTGAAGACCCCGTCCTGGCCGGTACATATGCCGCCAGTTACGTCAAGGGCCTACAGGGAGACGACGGTAACCGGTTGAAGGTCGCAGCCTGCTGTAAGCACTTTACGGCCTATGACCTCGATAATTGGAAGGGGGTGGATCGCTTCCATTTTAATGCACAGGTGAGCAAGCAGGACATAGAGGATACGTTCGATGTGCCATTCAGAATGTGTGTGAAGGATGGCAGAGTGGCGAGCGTCATGTGCTCTTACAATCAAGTGAATGGCGTCCCCACCTGCGCCGATCCTAACCTCCTCAAGAAAACTGTTCGCGCCCAATGGCGTCTTGATGGATACATCGTATCAGATTGCGACTCTGTTGGGGTGCTCTTCGCTAGCCAGCATTATGCATCGTCACCGGAAAAGGCTGCTGCTGCTGCTATCAAAGCAGGATTGGATTTGGACTGTGGGCCTTTCTTGGGAATGCACACGCAAGATGCGGTGAAGAAAGGGTTGTTGAGCGAAGCGGACGTCAACGGTGCGCTGGTGAATACCCTCACCGTCCAAATGAGGCTGGGCATGTTTGACGGAGGGCCCTCGGCTCAACCATATGGCAAGCTGGGTCCTGCCGATGTGTGCTCCAACGCTCACCAAGACCTGGCTCATGAAGCCGCCGTACAGGGAATCGTTCTCCTCAGGAACTCCGGCCCTACTTTGCCCCTCTCTCCGCGTCGTCACCGCACCGTCGCCGTCATCGGCCCTAATTCTGATGCCTCTGTTACCATGATCGGTAATTATGCCGGTGTTGCTTGCGGATACACGACCCCTTTACAAGGAATAGGGAGATACGCCAAGACGGTTCACCAAGAAGGTTGTGCAAATGTGGCTTGCGCCGATGACAAACTATTTGGAGCGGCTGTAAAGGCAGCCCGTCATACGGATGCCACTGTTCTTGTAATGGGCCTGGACCAATCCCTTGAGGCTGAAACTAGGGACAGGCCCACGTTGCTTATGCCCGGTCGTCAACAAGATCTTATTACCCAGGTGGCAGCCGCCTCCAAGGGCCCAACTATTTTGGTCCTAATGTCTGGTGGGCCCCTTGACATAACTTTTGCAAAGAAAAATCCACGAATTGCGGGCATATTGTGGGCCGGATATCCTGGCCAGGCCGGTGGAGCCGCCATCGCAGATATCTTGTTCGGAGCCGCCAACCCAGGAGGGAAGCTGCCAATGACATGGTATCCACAAGAGTATCTCACGGACTTGCCGATGACAGATATGAGAATGCGAGCGAGCCAACCCACAGGTTACCCGGGAAGAACCTATCGATTCTACAAGGGCCCGGTGGTGTACCAATTTGGGCACGGACTAGGCTACAGCCAGTTCGGGCACACGTTGGCAAGTGCACCGACGTTGGTGTCGGTTCCGGTGTATGGGCATCGCAAGGTCAACACGACAGACATTTCAAACAAGGCAATAAGGGTGACGCATGCGAGATGTGGAAAGCTGTCCATGGCCCTTCATGTAGATGTTAAGAATATGGGCTCTAAGGATGGCACTTATACCTTGTTAGTGTTCTCGGCACCACCTTCTGGGTCTCATTGGGCCCCGCACAAGCAATTGGTGGCCTTTCAGAAGGTACATGTCCCAGCCAAGGCTCAGCAACGAGTCCAAGTCCACATTCATGTTTGCAAATTCCTGAGCGTTGTTGATGAGTCTGGAATTCGAAGAATTCCGTTGGGCTCACACAGTCTCCACGTTGGGGATCTCAGACACTCCGTGTCACTTCAAGCTCAGAACCTGGGGATTATCAAGAACTGA 2328 0.5481 MAFPTSPLLVTVYLVVILVGVVVQMSEAEEPLACDPRDGNTKNLAFCRASLPIGERVRDLIERLTLEEKVKLLGDNAAAIPRLGIRGYEWWSEALHGVSNVGPGTRFAPPFPAATSFPQVITTAASFNGSLWEAIGRAVSDEARAMYNGGMGGLTFWSPNVNIFRDPRWGRGQETPGEDPVLAGTYAASYVKGLQGDDGNRLKVAACCKHFTAYDLDNWKGVDRFHFNAQVSKQDIEDTFDVPFRMCVKDGRVASVMCSYNQVNGVPTCADPNLLKKTVRAQWRLDGYIVSDCDSVGVLFASQHYASSPEKAAAAAIKAGLDLDCGPFLGMHTQDAVKKGLLSEADVNGALVNTLTVQMRLGMFDGGPSAQPYGKLGPADVCSNAHQDLAHEAAVQGIVLLRNSGPTLPLSPRRHRTVAVIGPNSDASVTMIGNYAGVACGYTTPLQGIGRYAKTVHQEGCANVACADDKLFGAAVKAARHTDATVLVMGLDQSLEAETRDRPTLLMPGRQQDLITQVAAASKGPTILVLMSGGPLDITFAKKNPRIAGILWAGYPGQAGGAAIADILFGAANPGGKLPMTWYPQEYLTDLPMTDMRMRASQPTGYPGRTYRFYKGPVVYQFGHGLGYSQFGHTLASAPTLVSVPVYGHRKVNTTDISNKAIRVTHARCGKLSMALHVDVKNMGSKDGTYTLLVFSAPPSGSHWAPHKQLVAFQKVHVPAKAQQRVQVHIHVCKFLSVVDESGIRRIPLGSHSLHVGDLRHSVSLQAQNLGIIKN 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0171 775 PRINTS Glycosyl hydrolase family 3 signature 204 220 IPR001764 GO:0004553|GO:0005975
Lele08g0171 775 PRINTS Glycosyl hydrolase family 3 signature 117 136 IPR001764 GO:0004553|GO:0005975
Lele08g0171 775 PRINTS Glycosyl hydrolase family 3 signature 278 296 IPR001764 GO:0004553|GO:0005975
Lele08g0171 775 Pfam Fibronectin type III-like domain 693 758 IPR026891 -
Lele08g0171 775 SMART Fn3_like_2 690 760 IPR026891 -
Lele08g0171 775 Pfam Glycosyl hydrolase family 3 N terminal domain 113 353 IPR001764 GO:0004553|GO:0005975
Lele08g0171 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 628 IPR002772 GO:0004553|GO:0005975
Lele08g0171 775 FunFam probable beta-D-xylosidase 7 56 370 - -
Lele08g0171 775 FunFam probable beta-D-xylosidase 2 383 629 - -
Lele08g0171 775 PANTHER SUGAR HYDROLASE-RELATED 23 763 IPR044993 GO:0009044|GO:0045493
Lele08g0171 775 Gene3D - 383 629 IPR036881 GO:0004553|GO:0005975
Lele08g0171 775 Gene3D - 56 372 IPR036962 GO:0004553|GO:0005975
Lele08g0171 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 631 IPR036881 GO:0004553|GO:0005975
Lele08g0171 775 Gene3D Immunoglobulins 651 772 IPR013783 -
Lele08g0171 775 SUPERFAMILY (Trans)glycosidases 45 397 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0171 Lele-ChrLele08 1071142 1075682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0171 13 775 Glycoside Hydrolase AT1G02640 71.540 0.0 1160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0171 08 1071142 1075682 Lele08g0171 08 1071142 1075682 ECH
Lele05g0351 05 2012306 2017464 Lele08g0171 08 1071142 1075682 hybridization
Lele06g0169 06 1026865 1028995 Lele08g0171 08 1071142 1075682 hybridization