Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0164 ATGGCTTCGAATCACCTTCTAGCAAGTTCGGGATCTGATGAACCAAGATCTGATGTTATGGACGAGAGGAAGAGGAAGAGGATGCAATCTAACCGTGAATCCGCGAGGCGATCGCGGATGAAGAAGCAGAAGCAACTTGAAGATCTGACCAATGAGATCAGCCGATTGCAAAGTGCAAACAGTCTTTTAGTTCAGAACATAAAGGAAAAGGAGGATGCATACAATGAGATTGAATCCAACAACACTGTCCTTAGGGCGCAGACTACGGAGTTATTCGAACGATTGCGTTTTCTAAACTCGATACTTGAGATCGCTGAAGAGGTCAGTGGGCTCTCTGTTGAGATCCCCGAGATACCAGATCCTCTCCTGAAGCCATGGCAGCTTTCTTATCCGATACAGCAGATCACGGCTTCTTCAAACTTCGTCCTGCATTGA 435 0.4644 MASNHLLASSGSDEPRSDVMDERKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSLLVQNIKEKEDAYNEIESNNTVLRAQTTELFERLRFLNSILEIAEEVSGLSVEIPEIPDPLLKPWQLSYPIQQITASSNFVLH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0164 144 Gene3D - 21 75 - -
Lele08g0164 144 Pfam bZIP transcription factor 23 81 IPR004827 GO:0003700|GO:0006355
Lele08g0164 144 SUPERFAMILY Leucine zipper domain 23 76 IPR046347 GO:0003700|GO:0006355
Lele08g0164 144 MobiDBLite consensus disorder prediction 15 47 - -
Lele08g0164 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Lele08g0164 144 FunFam BZIP transcription factor 21 72 - -
Lele08g0164 144 Coils Coil 32 87 - -
Lele08g0164 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 106 - -
Lele08g0164 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Lele08g0164 144 MobiDBLite consensus disorder prediction 1 47 - -
Lele08g0164 144 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Lele08g0164 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0164 Lele-ChrLele08 1006112 1006546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0164 1 141 bZIP Transcription Factor Family AT3G62420 53.147 1.28e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele08g0164 bZIP_1 7.7e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0164 08 1006112 1006546 Lele13g2120 13 28016581 28016955 CCT
Lele08g0164 08 1006112 1006546 Lele15g0292 15 1650909 1651283 CCT
Lele08g0164 08 1006112 1006546 Lele16g0305 16 1694369 1694881 CCT
Lele13g2130 13 28073026 28076132 Lele08g0164 08 1006112 1006546 CCT
Lele14g2055 14 26403677 26406177 Lele08g0164 08 1006112 1006546 CCT
Lele15g0281 15 1593307 1596548 Lele08g0164 08 1006112 1006546 CCT
Lele16g0296 16 1639541 1650490 Lele08g0164 08 1006112 1006546 CCT
Lele08g0164 08 1006112 1006546 Lele08g0164 08 1006112 1006546 ECH
Lele07g0360 07 2001905 2003249 Lele08g0164 08 1006112 1006546 ECH
Lele05g0342 05 1943836 1944676 Lele08g0164 08 1006112 1006546 hybridization
Lele06g0161 06 975025 975459 Lele08g0164 08 1006112 1006546 hybridization