Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0158 ATGGAGCTTAACAGAAAAATCATCCTTGTGGTTCCCCTGATCTGTTGCTCGCTCCTTTCGGCCATCGACGCCACTCGCTCACATCGCTTCAAACCGTCGGAAGAGCCTTCGCCGGCAGCCCCAGCTCCGTCTCCCTCCGACGTCGGAGGCAACACAGGGGCGTCGCAGCAAAACCCCCAGCTGGTAGCTCTGTGCAAGGACGCAGATGCACCATCTCTCTGCGTGGAGACCATCGCGCCATTCATCCACGGCTCACTTGACCCCGTGGAGGCCGTTAAGGTCGAAATGGGGGCTGCCATGAACATGACTATGAAGGTCTCTGAAACAATCAAGACTTTGCGTGACAAACCAGTTCTCAGTGCTGACGACATAGCGTCACTGGACATATGCGCAGACCAGTACGGTTCGATTATGGATACTATAAATGATTGTTTGGATTCGATCAAGCAGAACGACGTGTACGGTGCTTGGATGAAGTTCTCGTCGGTGTTGTCGTTCCAACAGGCATGTGAAGATGCTTTTAAGGAAGGGAGCACGCCCATCCCATTCCCGGAGGATTCCAAGACTCTGTTCCTGCTGGGTGGTAATTGCTTGGCCATCCTCATGCATCTTTCTGGTGAAACCTCGTCTTATTAA 636 0.5299 MELNRKIILVVPLICCSLLSAIDATRSHRFKPSEEPSPAAPAPSPSDVGGNTGASQQNPQLVALCKDADAPSLCVETIAPFIHGSLDPVEAVKVEMGAAMNMTMKVSETIKTLRDKPVLSADDIASLDICADQYGSIMDTINDCLDSIKQNDVYGAWMKFSSVLSFQQACEDAFKEGSTPIPFPEDSKTLFLLGGNCLAILMHLSGETSSY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0158 211 SMART PMEI_2 56 200 IPR006501 GO:0004857
Lele08g0158 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 206 IPR035513 -
Lele08g0158 211 CDD PMEI-like_2 58 200 - -
Lele08g0158 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 54 205 - -
Lele08g0158 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 202 IPR035513 -
Lele08g0158 211 MobiDBLite consensus disorder prediction 29 53 - -
Lele08g0158 211 Pfam Plant invertase/pectin methylesterase inhibitor 63 200 IPR006501 GO:0004857
Lele08g0158 211 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0158 Lele-ChrLele08 978361 978996 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0158 08 978361 978996 Lele13g2129 13 28065575 28068867 CCT
Lele08g0158 08 978361 978996 Lele14g2054 14 26396476 26401957 CCT
Lele08g0158 08 978361 978996 Lele15g0282 15 1599773 1605223 CCT
Lele05g0336 05 1921540 1922190 Lele08g0158 08 978361 978996 hybridization